RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 FLYWCH2Q96CP2 140 aaKnown RBP10.87□□□□□ -0.67
HERPUD1-218ENST00000569569 TSNAXQ99598 290 aaKnown RBP10.87□□□□□ -0.67
HERPUD1-218ENST00000569569 OR51J1Q9H342 316 aa10.87□□□□□ -0.67
HERPUD1-218ENST00000569569 FBXL15Q9H469 300 aa10.87□□□□□ -0.67
HERPUD1-218ENST00000569569 SLC35D1Q9NTN3 355 aa10.87□□□□□ -0.67
HERPUD1-218ENST00000569569 ZFP57Q9NU63 452 aa10.87□□□□□ -0.67
HERPUD1-218ENST00000569569 COMMD3Q9UBI1 195 aa10.87□□□□□ -0.67
HERPUD1-218ENST00000569569 IGHV7-81A0A0B4J1V7 117 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 J3QRK9 145 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 IGKV1-16P04430 117 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 OR5H8P0DN80 308 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 VDAC1P21796 283 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 THBS3P49746 956 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 PLGLAQ15195 96 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 ZNF645Q8N7E2 425 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 ADTRPQ96IZ2 230 aa10.86□□□□□ -0.67
HERPUD1-218ENST00000569569 NOTCH1P46531 2555 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 SMIM31A0A1B0GVY4 71 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 TUSC2O75896 110 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 SPDEFO95238 335 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 APOA1P02647 267 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 ELANEP08246 267 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 RRASP10301 218 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 PF4V1P10720 104 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 DUTP33316 252 aaKnown RBP10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 LGALS7P47929 136 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 TAS2R20P59543 309 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 RPL23AP62750 156 aaKnown RBP10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 CBX3Q13185 183 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 PSG5Q15238 335 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 ZNF660Q6AZW8 331 aaPredicted RBP10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 MZT2AQ6P582 158 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 AP3S1Q92572 193 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 C5orf30Q96GV9 206 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 NECAP2Q9NVZ3 263 aa10.85□□□□□ -0.67
HERPUD1-218ENST00000569569 MEIS3P1A6NDR6 274 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 FCN1O00602 326 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 ATP6V0E1O15342 81 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 IGHG4P01861 327 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 EIF4EP06730 217 aaKnown RBP10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 ZNF182P17025 639 aaPredicted RBP10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 SLC6A1P30531 599 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 PRSS3P35030 304 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 CFHR3Q02985 330 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 FOXE3Q13461 319 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 RTL8BQ17RB0 113 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 CXorf66Q5JRM2 361 aaPredicted RBP10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 BVESQ8NE79 360 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 OR5AP2Q8NGF4 316 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 DDB2Q92466 427 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 IFT46Q9NQC8 304 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 PARP11Q9NR21 331 aa10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 METTL1Q9UBP6 276 aaKnown RBP10.84□□□□□ -0.67
HERPUD1-218ENST00000569569 IGKV1D-13A0A0B4J2D9 117 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 LINC00473A8K010 186 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 SHOXO15266 292 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 HPGDSO60760 199 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 PF4P02776 101 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 FCER2P06734 321 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 IGKV1-13P0DP09 117 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 PPIFP30405 207 aaKnown RBP10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 FCGR2CP31995 323 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 CX3CL1P78423 397 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 TMEM177Q53S58 311 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 ZNF562Q6V9R5 426 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 RNF152Q8N8N0 203 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 SNAPC3Q92966 411 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 CLCC1Q96S66 551 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 MRPS7Q9Y2R9 242 aaKnown RBP10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 RBMX2Q9Y388 322 aaKnown RBP10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 WSB1Q9Y6I7 421 aa10.83□□□□□ -0.68
HERPUD1-218ENST00000569569 TRAV41A0A0B4J266 112 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 G3V318 75 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 SLC25A17O43808 307 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 IGLV2-14P01704 120 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 IGLV2-23P01705 113 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 RPLP1P05386 114 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 ELK1P19419 428 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 AADACP22760 399 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 PSMB8P28062 276 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 RPL5P46777 297 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 CDX1P47902 265 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 CRIP2P52943 208 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 TMEM267Q0VDI3 215 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 CDK10Q15131 360 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 CLVS1Q8IUQ0 354 aaPredicted RBP10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 WFDC9Q8NEX5 89 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 GIMAP1Q8WWP7 306 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 HARBI1Q96MB7 349 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 HSD17B10Q99714 261 aaKnown RBP10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 ANAPC10Q9UM13 185 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 PRELID3BQ9Y3B1 194 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 NUBP2Q9Y5Y2 271 aa10.82□□□□□ -0.68
HERPUD1-218ENST00000569569 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
HERPUD1-218ENST00000569569 NUDT19A8MXV4 375 aa10.81□□□□□ -0.68
HERPUD1-218ENST00000569569 FAM25AB3EWG3 89 aa10.81□□□□□ -0.68
HERPUD1-218ENST00000569569 FAM25CB3EWG5 89 aa10.81□□□□□ -0.68
HERPUD1-218ENST00000569569 FAM25GB3EWG6 89 aa10.81□□□□□ -0.68
HERPUD1-218ENST00000569569 CA2P00918 260 aa10.81□□□□□ -0.68
HERPUD1-218ENST00000569569 PPYP01298 95 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms