RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 MIOXQ9UGB7 285 aa18.48■□□□□ 0.55
VCPKMT-205ENST00000569518 RPS10-NUDT3A0A1W2PQS6 291 aa18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 RBFOX2O43251 390 aaKnown RBP eCLIP18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 OR8H3Q8N146 312 aa18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 LYG1Q8N1E2 194 aa18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 C11orf42Q8N5U0 333 aa18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 STOML3Q8TAV4 291 aa18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 MAGT1Q9H0U3 335 aa18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 MALRD1Q5VYJ5 2156 aa18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 SPTAN1Q13813 2472 aaKnown RBP18.47■□□□□ 0.55
VCPKMT-205ENST00000569518 G6PCP35575 357 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 TMEM33P57088 247 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 ALKAL2Q6UX46 152 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 C8orf31Q8N9H6 132 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 NEIL1Q96FI4 390 aaPredicted RBP18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 A0A087X0M5 115 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 A0A1B0GX30 115 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 SSSCA1O60232 199 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 ATG12O94817 140 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 F12P00748 615 aaPredicted RBP18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 KRASP01116 189 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 MMP9P14780 707 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 GPR157Q5UAW9 335 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 OR8B3Q8NGG8 313 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 C8orf46Q8TAG6 207 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 ZNF596Q8TC21 504 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 SCARB1Q8WTV0 552 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 OR8B2Q96RD0 313 aa18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 UBR5O95071 2799 aaPredicted RBP18.46■□□□□ 0.55
VCPKMT-205ENST00000569518 NDUFS7O75251 213 aa18.45■□□□□ 0.54
VCPKMT-205ENST00000569518 TMEM50AO95807 157 aa18.45■□□□□ 0.54
VCPKMT-205ENST00000569518 WDR25Q64LD2 544 aaPredicted RBP18.45■□□□□ 0.54
VCPKMT-205ENST00000569518 RAB39BQ96DA2 213 aa18.45■□□□□ 0.54
VCPKMT-205ENST00000569518 ZNRD1Q9P1U0 126 aa18.45■□□□□ 0.54
VCPKMT-205ENST00000569518 OVOL3O00110 214 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 TAAR5O14804 337 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 GPR137BO60478 399 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 FCGR3BO75015 233 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 NXPH3O95157 252 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 KIR2DS2P43631 304 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 MIDNQ504T8 468 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 CLLU1Q5K131 121 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 ZNF295-AS1Q8N0V1 137 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 IGFBPL1Q8WX77 278 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 SPOCK3Q9BQ16 436 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 GSX2Q9BZM3 304 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 PRELID3BQ9Y3B1 194 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 IGHV1-8P0DP01 117 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 PVALBP20472 110 aaPredicted RBP18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 THBS3P49746 956 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 EFNA4P52798 201 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 LINC00311Q8N616 119 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 ZNF383Q8NA42 475 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 PHYHIPLQ96FC7 376 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 ZC4H2Q9NQZ6 224 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 LYRM2Q9NU23 88 aaPredicted RBP18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 COL12A1Q99715 3063 aa18.44■□□□□ 0.54
VCPKMT-205ENST00000569518 MARCH11A6NNE9 402 aa18.43■□□□□ 0.54
VCPKMT-205ENST00000569518 HPRT1P00492 218 aa18.43■□□□□ 0.54
VCPKMT-205ENST00000569518 TLE4Q04727 773 aa18.43■□□□□ 0.54
VCPKMT-205ENST00000569518 ZNF833PQ6ZTB9 187 aa18.43■□□□□ 0.54
VCPKMT-205ENST00000569518 OR2C3Q8N628 320 aa18.43■□□□□ 0.54
VCPKMT-205ENST00000569518 ADTRPQ96IZ2 230 aa18.43■□□□□ 0.54
VCPKMT-205ENST00000569518 S1PR3Q99500 378 aa18.43■□□□□ 0.54
VCPKMT-205ENST00000569518 FBXL17Q9UF56 701 aa18.43■□□□□ 0.54
VCPKMT-205ENST00000569518 CHST1O43916 411 aa18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 PAX9P55771 341 aa18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 R3HDM4Q96D70 268 aa18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 BSCL2Q96G97 398 aaPredicted RBP18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 PATZ1Q9HBE1 687 aaKnown RBP18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 FAM90A26D6RGX4 464 aa18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 TOR1AO14656 332 aa18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 LY6G5BQ8NDX9 201 aa18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 SESN1Q9Y6P5 492 aa18.42■□□□□ 0.54
VCPKMT-205ENST00000569518 IGSF23A1L1A6 192 aa18.41■□□□□ 0.54
VCPKMT-205ENST00000569518 J3QR06 171 aa18.41■□□□□ 0.54
VCPKMT-205ENST00000569518 WRBO00258 174 aa18.41■□□□□ 0.54
VCPKMT-205ENST00000569518 RBP4P02753 201 aa18.41■□□□□ 0.54
VCPKMT-205ENST00000569518 TPT1P13693 172 aaKnown RBP18.41■□□□□ 0.54
VCPKMT-205ENST00000569518 SRSF1Q07955 248 aaKnown RBP eCLIP18.41■□□□□ 0.54
VCPKMT-205ENST00000569518 OR4S2Q8NH73 311 aa18.41■□□□□ 0.54
VCPKMT-205ENST00000569518 RAB40CQ96S21 281 aa18.41■□□□□ 0.54
VCPKMT-205ENST00000569518 FAM24AA6NFZ4 105 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 GAPDHP04406 335 aaKnown RBP18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 CT45A6P0DMU7 189 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 CT45A5P0DMU8 189 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 CT45A7P0DMV0 189 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 VAMP2P63027 116 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 EWSR1Q01844 656 aaKnown RBP eCLIP18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 CLEC9AQ6UXN8 241 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 H2BFWTQ7Z2G1 175 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 BAP18Q8IXM2 172 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 PCNPQ8WW12 178 aaKnown RBP18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 HSPB7Q9UBY9 170 aa18.4■□□□□ 0.54
VCPKMT-205ENST00000569518 PPIAL4CA0A0B4J2A2 164 aa18.39■□□□□ 0.54
VCPKMT-205ENST00000569518 C22orf46C9J442 243 aa18.39■□□□□ 0.54
VCPKMT-205ENST00000569518 SYNGR2O43760 224 aa18.39■□□□□ 0.54
VCPKMT-205ENST00000569518 PPIAL4GP0DN37 164 aa18.39■□□□□ 0.54
VCPKMT-205ENST00000569518 CAV2P51636 162 aa18.39■□□□□ 0.54
VCPKMT-205ENST00000569518 RPL7L1Q6DKI1 246 aaKnown RBP18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms