RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 PDCD6O75340 191 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 ACTL6BO94805 426 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 OR2C1O95371 312 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 SOX2P48431 317 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 MFAP2P55001 183 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 CMC4P56277 68 aaPredicted RBP6.42□□□□□ -1.38
SMG1-216ENST00000569122 NANOS2P60321 138 aaKnown RBP6.42□□□□□ -1.38
SMG1-216ENST00000569122 SNRPGP62308 76 aaKnown RBP6.42□□□□□ -1.38
SMG1-216ENST00000569122 HSP90B2PQ58FF3 399 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 KDM4DQ6B0I6 523 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 LAMTOR1Q6IAA8 161 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 SPATA24Q86W54 205 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 ZDHHC13Q8IUH4 622 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 CDH26Q8IXH8 852 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 UXS1Q8NBZ7 420 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 KCNG3Q8TAE7 436 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 MRPL30Q8TCC3 161 aaKnown RBP6.42□□□□□ -1.38
SMG1-216ENST00000569122 NEDD4LQ96PU5 975 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 OR14A2Q96R54 314 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 SPIN2AQ99865 258 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 SPAG8Q99932 426 aaPredicted RBP6.42□□□□□ -1.38
SMG1-216ENST00000569122 SPIN2BQ9BPZ2 258 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 PDCD1LG2Q9BQ51 273 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 IMPAD1Q9NX62 359 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 MGAT4AQ9UM21 535 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 MUC4Q99102 2169 aa6.42□□□□□ -1.38
SMG1-216ENST00000569122 A0A1W2PP11 408 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 MPTX1A8MV57 137 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 A8MWP6 167 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 SHOXO15266 292 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 CDK2AP2O75956 126 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 P0DMU3 169 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 FAM231AP0DMU4 169 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 FAM231CP0DMU5 169 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 RRASP10301 218 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 MYOD1P15172 320 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 CTRB1P17538 263 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 ZBTB25P24278 435 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 TPBGQ13641 420 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 HMGN3Q15651 99 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 C15orf32Q32M92 178 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 VMA21Q3ZAQ7 101 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 CTRB2Q6GPI1 263 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 GLIPR1L1Q6UWM5 242 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 MOB1BQ7L9L4 216 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 ABHD14BQ96IU4 210 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 ZNF184Q99676 751 aaPredicted RBP6.41□□□□□ -1.38
SMG1-216ENST00000569122 AGMATQ9BSE5 352 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 KRTAP3-3Q9BYR6 98 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 KRTAP3-2Q9BYR7 98 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 SELENOIQ9C0D9 397 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 FAM107BQ9H098 131 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 CSTL1Q9H114 145 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 RIMS4Q9H426 269 aaPredicted RBP6.41□□□□□ -1.38
SMG1-216ENST00000569122 C5orf66Q9H5L9 145 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 MAP6D1Q9H9H5 199 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 SLC35D1Q9NTN3 355 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 MRPL27Q9P0M9 148 aaKnown RBP6.41□□□□□ -1.38
SMG1-216ENST00000569122 MLXQ9UH92 298 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 ARL2BPQ9Y2Y0 163 aa6.41□□□□□ -1.38
SMG1-216ENST00000569122 DNAH6Q9C0G6 4158 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 TMEM213A2RRL7 107 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 DYNC1I1O14576 645 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 CRTAPO75718 401 aaPredicted RBP6.4□□□□□ -1.38
SMG1-216ENST00000569122 DHFRP00374 187 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 CRYGBP07316 175 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 MGMTP16455 207 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 GALP22466 123 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 CALB2P22676 271 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 ARL3P36405 182 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 CEACAM6P40199 344 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 ELLP55199 621 aaPredicted RBP6.4□□□□□ -1.38
SMG1-216ENST00000569122 DEFA5Q01523 94 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 PJVKQ0ZLH3 352 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 RTL8BQ17RB0 113 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 LGALS9BQ3B8N2 356 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 CCDC58Q4VC31 144 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 RPL22L1Q6P5R6 122 aaKnown RBP6.4□□□□□ -1.38
SMG1-216ENST00000569122 BTNL8Q6UX41 500 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 LHFPL3Q86UP9 236 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 TTC9CQ8N5M4 171 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 TEX45Q8NA69 505 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 DRAXINQ8NBI3 349 aaPredicted RBP6.4□□□□□ -1.38
SMG1-216ENST00000569122 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.4□□□□□ -1.38
SMG1-216ENST00000569122 PTX4Q96A99 478 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 HARBI1Q96MB7 349 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 HRH4Q9H3N8 390 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 CHMP1AQ9HD42 196 aaPredicted RBP6.4□□□□□ -1.38
SMG1-216ENST00000569122 GHRLQ9UBU3 117 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 EXOGQ9Y2C4 368 aaKnown RBP6.4□□□□□ -1.38
SMG1-216ENST00000569122 UFC1Q9Y3C8 167 aa6.4□□□□□ -1.38
SMG1-216ENST00000569122 RPL36Q9Y3U8 105 aaKnown RBP6.4□□□□□ -1.38
SMG1-216ENST00000569122 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 OR4C46A6NHA9 309 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 PPP5D1E7EU14 171 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 TSPAN4O14817 238 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 RTL8CO15255 209 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 BAG2O95816 211 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 IGLV2-23P01705 113 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms