RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-207ENST00000568782 UBE2E2Q96LR5 201 aa8.14□□□□□ -1.11
UBR1-207ENST00000568782 CLCC1Q96S66 551 aa8.14□□□□□ -1.11
UBR1-207ENST00000568782 TOLLIPQ9H0E2 274 aa8.14□□□□□ -1.11
UBR1-207ENST00000568782 PARP12Q9H0J9 701 aaKnown RBP8.14□□□□□ -1.11
UBR1-207ENST00000568782 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.14□□□□□ -1.11
UBR1-207ENST00000568782 RHBDL2Q9NX52 303 aa8.14□□□□□ -1.11
UBR1-207ENST00000568782 VSIG4Q9Y279 399 aa8.14□□□□□ -1.11
UBR1-207ENST00000568782 A3GALT2U3KPV4 340 aa8.14□□□□□ -1.11
UBR1-207ENST00000568782 NOTCH3Q9UM47 2321 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 A0A0A6YYH2 397 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 IGHV7-81A0A0B4J1V7 117 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 IGKV1-6A0A0C4DH72 117 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 A6NJ64 397 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 AIREO43918 545 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 PSMB8P28062 276 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 DCTN2Q13561 401 aaKnown RBP8.13□□□□□ -1.11
UBR1-207ENST00000568782 ACTBL2Q562R1 376 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 CNIH2Q6PI25 160 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 UNQ5815/PRO19632Q6UWF5 114 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 ZNF562Q6V9R5 426 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 PPP1R27Q86WC6 154 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 NR2C2APQ86WQ0 139 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 LINC00482Q8N8I6 264 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 RNF152Q8N8N0 203 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 S100A16Q96FQ6 103 aaKnown RBP8.13□□□□□ -1.11
UBR1-207ENST00000568782 RITA1Q96K30 269 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 HARBI1Q96MB7 349 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 DCUN1D5Q9BTE7 237 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 ZNF355PQ9NSJ1 428 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 SDHAF2Q9NX18 166 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 FOXA2Q9Y261 457 aaPredicted RBP8.13□□□□□ -1.11
UBR1-207ENST00000568782 MRPS7Q9Y2R9 242 aaKnown RBP8.13□□□□□ -1.11
UBR1-207ENST00000568782 PRELID3BQ9Y3B1 194 aa8.13□□□□□ -1.11
UBR1-207ENST00000568782 TRAV18A0A075B6X5 111 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 TMEM235A6NFC5 223 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 G3V318 75 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 SLC25A17O43808 307 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 CREBL2O60519 120 aaPredicted RBP8.12□□□□□ -1.11
UBR1-207ENST00000568782 ACTL6BO94805 426 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 PRB2P02812 416 aaPredicted RBP8.12□□□□□ -1.11
UBR1-207ENST00000568782 OR8U8P0C7N1 319 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 RAB9AP51151 201 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 CX3CL1P78423 397 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 FXYD3Q14802 87 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 PSG5Q15238 335 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 VMA21Q3ZAQ7 101 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 AKIRIN2Q53H80 203 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 DEFB121Q5J5C9 76 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 ZNF383Q8NA42 475 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 OR11H1Q8NG94 326 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 TMEM68Q96MH6 324 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 SLA2Q9H6Q3 261 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 SPATA2Q9UM82 520 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 OR2W1Q9Y3N9 320 aa8.12□□□□□ -1.11
UBR1-207ENST00000568782 NOTCH1P46531 2555 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 SMIM31A0A1B0GVY4 71 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 J3QRK9 145 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 RAMP3O60896 148 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 TUSC2O75896 110 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 CA2P00918 260 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 IGKV1-16P04430 117 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 PPIFP30405 207 aaKnown RBP8.11□□□□□ -1.11
UBR1-207ENST00000568782 CBX5P45973 191 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 GNB1P62873 340 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 CFHR3Q02985 330 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 ZNF616Q08AN1 781 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 ZNF260Q3ZCT1 412 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 C9orf66Q5T8R8 295 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 C18orf65Q6ZTR6 163 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 H1FOOQ8IZA3 346 aaPredicted RBP8.11□□□□□ -1.11
UBR1-207ENST00000568782 ZNF645Q8N7E2 425 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 ZNF491Q8N8L2 437 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 BVESQ8NE79 360 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 OR1N2Q8NGR9 330 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 NUDCD2Q8WVJ2 157 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 ARPC1AQ92747 370 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 RBMXL1Q96E39 390 aaKnown RBP8.11□□□□□ -1.11
UBR1-207ENST00000568782 RAX2Q96IS3 184 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 DUX3Q96PT4 197 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 P2RX4Q99571 388 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 PHB2Q99623 299 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 IFT46Q9NQC8 304 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 AURKAIP1Q9NWT8 199 aaPredicted RBP8.11□□□□□ -1.11
UBR1-207ENST00000568782 ANXA10Q9UJ72 324 aa8.11□□□□□ -1.11
UBR1-207ENST00000568782 A0A0G2JLM5 398 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 MPPED1O15442 326 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 IGLV1-40P01703 118 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 CLEC2LP0C7M8 214 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 NFYAP23511 347 aaPredicted RBP8.1□□□□□ -1.11
UBR1-207ENST00000568782 DEFB136Q30KP8 78 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 ETV3LQ6ZN32 361 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 KCTD9Q7L273 389 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 MINDY2Q8NBR6 621 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 LFNGQ8NES3 379 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 BEST4Q8NFU0 473 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 GRPEL2Q8TAA5 225 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 OSR1Q8TAX0 266 aaPredicted RBP8.1□□□□□ -1.11
UBR1-207ENST00000568782 BORCS5Q969J3 196 aa8.1□□□□□ -1.11
UBR1-207ENST00000568782 HSD17B10Q99714 261 aaKnown RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms