RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SLC35D1Q9NTN3 355 aa19.73■□□□□ 0.75
FANCA-228ENST00000567943 IGHV7-81A0A0B4J1V7 117 aa19.72■□□□□ 0.75
FANCA-228ENST00000567943 XRCC3O43542 346 aa19.72■□□□□ 0.75
FANCA-228ENST00000567943 PF4P02776 101 aa19.72■□□□□ 0.75
FANCA-228ENST00000567943 RPS16P62249 146 aaKnown RBP19.72■□□□□ 0.75
FANCA-228ENST00000567943 ANKRD13BQ86YJ7 626 aa19.72■□□□□ 0.75
FANCA-228ENST00000567943 PDPNQ86YL7 162 aa19.72■□□□□ 0.75
FANCA-228ENST00000567943 BEST4Q8NFU0 473 aa19.72■□□□□ 0.75
FANCA-228ENST00000567943 KCTD12Q96CX2 325 aaKnown RBP19.72■□□□□ 0.75
FANCA-228ENST00000567943 PARP11Q9NR21 331 aa19.72■□□□□ 0.75
FANCA-228ENST00000567943 ATP6V0E1O15342 81 aa19.71■□□□□ 0.75
FANCA-228ENST00000567943 GPR107Q5VW38 600 aa19.71■□□□□ 0.75
FANCA-228ENST00000567943 C8orf86Q6ZUL3 223 aa19.71■□□□□ 0.75
FANCA-228ENST00000567943 LINC00482Q8N8I6 264 aa19.71■□□□□ 0.75
FANCA-228ENST00000567943 ZFP57Q9NU63 452 aa19.71■□□□□ 0.75
FANCA-228ENST00000567943 OR2W1Q9Y3N9 320 aa19.71■□□□□ 0.75
FANCA-228ENST00000567943 WSB1Q9Y6I7 421 aa19.71■□□□□ 0.75
FANCA-228ENST00000567943 GABARAPO95166 117 aa19.7■□□□□ 0.74
FANCA-228ENST00000567943 RPLP1P05386 114 aaKnown RBP19.7■□□□□ 0.74
FANCA-228ENST00000567943 FCER2P06734 321 aa19.7■□□□□ 0.74
FANCA-228ENST00000567943 LUMP51884 338 aaPredicted RBP19.7■□□□□ 0.74
FANCA-228ENST00000567943 ARPC4P59998 168 aa19.7■□□□□ 0.74
FANCA-228ENST00000567943 PSG5Q15238 335 aa19.7■□□□□ 0.74
FANCA-228ENST00000567943 HOGA1Q86XE5 327 aa19.7■□□□□ 0.74
FANCA-228ENST00000567943 RNF152Q8N8N0 203 aa19.7■□□□□ 0.74
FANCA-228ENST00000567943 FLYWCH2Q96CP2 140 aaKnown RBP19.7■□□□□ 0.74
FANCA-228ENST00000567943 TSNAXQ99598 290 aaKnown RBP19.7■□□□□ 0.74
FANCA-228ENST00000567943 COMMD3Q9UBI1 195 aa19.7■□□□□ 0.74
FANCA-228ENST00000567943 METTL1Q9UBP6 276 aaKnown RBP19.7■□□□□ 0.74
FANCA-228ENST00000567943 ZNF580Q9UK33 172 aa19.7■□□□□ 0.74
FANCA-228ENST00000567943 OR5H8P0DN80 308 aa19.69■□□□□ 0.74
FANCA-228ENST00000567943 THBS3P49746 956 aa19.69■□□□□ 0.74
FANCA-228ENST00000567943 CTF1Q16619 201 aa19.69■□□□□ 0.74
FANCA-228ENST00000567943 CXorf66Q5JRM2 361 aaPredicted RBP19.69■□□□□ 0.74
FANCA-228ENST00000567943 TMEM69Q5SWH9 247 aa19.69■□□□□ 0.74
FANCA-228ENST00000567943 FOXB2Q5VYV0 432 aa19.69■□□□□ 0.74
FANCA-228ENST00000567943 MRPL41Q8IXM3 137 aaKnown RBP19.69■□□□□ 0.74
FANCA-228ENST00000567943 MEIS3P1A6NDR6 274 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 NUDT19A8MXV4 375 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 G3V318 75 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 FCN1O00602 326 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 HLA-DQB1P01920 261 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 ELANEP08246 267 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 ALDH3B2P48448 385 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 TAS2R20P59543 309 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 CX3CL1P78423 397 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 NDPQ00604 133 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 FOXE3Q13461 319 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 ZNF645Q8N7E2 425 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 BVESQ8NE79 360 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 CLCC1Q96S66 551 aa19.68■□□□□ 0.74
FANCA-228ENST00000567943 IGKV1D-13A0A0B4J2D9 117 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 SPDEFO95238 335 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 IGHG4P01861 327 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 EIF4EP06730 217 aaKnown RBP19.67■□□□□ 0.74
FANCA-228ENST00000567943 IGKV1-13P0DP09 117 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 DUTP33316 252 aaKnown RBP19.67■□□□□ 0.74
FANCA-228ENST00000567943 CBX5P45973 191 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 RORCP51449 518 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 TAGLNQ01995 201 aaKnown RBP19.67■□□□□ 0.74
FANCA-228ENST00000567943 ZNF660Q6AZW8 331 aaPredicted RBP19.67■□□□□ 0.74
FANCA-228ENST00000567943 GPR141Q7Z602 305 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 KLHL30-AS1Q8NEE0 82 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 ADTRPQ96IZ2 230 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 P2RX4Q99571 388 aa19.67■□□□□ 0.74
FANCA-228ENST00000567943 TRAV41A0A0B4J266 112 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 SLC25A17O43808 307 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 TUSC2O75896 110 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 CBX3Q13185 183 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 RTL8BQ17RB0 113 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 ZNF695Q8IW36 515 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 ABHD5Q8WTS1 349 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 ACOT12Q8WYK0 555 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 DUX3Q96PT4 197 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 NECAP2Q9NVZ3 263 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 FBXO7Q9Y3I1 522 aa19.66■□□□□ 0.74
FANCA-228ENST00000567943 LINC00473A8K010 186 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 PSMB8P28062 276 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 PPIFP30405 207 aaKnown RBP19.65■□□□□ 0.74
FANCA-228ENST00000567943 DDB2Q92466 427 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 SNAPC3Q92966 411 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 RCC1LQ96I51 464 aaKnown RBP19.65■□□□□ 0.74
FANCA-228ENST00000567943 RAX2Q96IS3 184 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 HARBI1Q96MB7 349 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 IFT46Q9NQC8 304 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 TPSG1Q9NRR2 321 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 AURKAIP1Q9NWT8 199 aaPredicted RBP19.65■□□□□ 0.74
FANCA-228ENST00000567943 A3GALT2U3KPV4 340 aa19.65■□□□□ 0.74
FANCA-228ENST00000567943 SHOXO15266 292 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 SLC22A5O76082 557 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 CA2P00918 260 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 IGLV2-23P01705 113 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 RRASP10301 218 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 SLC6A1P30531 599 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 FCGR2CP31995 323 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 LGALS7P47929 136 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 ECSCRQ19T08 205 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 TMEM177Q53S58 311 aa19.64■□□□□ 0.73
FANCA-228ENST00000567943 RBMX2Q9Y388 322 aaKnown RBP19.64■□□□□ 0.73
FANCA-228ENST00000567943 HPGDSO60760 199 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms