RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 PLGLAQ15195 96 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 PSG5Q15238 335 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 ECSCRQ19T08 205 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 HES5Q5TA89 166 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 ZNF429Q86V71 674 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 TPRA1Q86W33 373 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 PDPNQ86YL7 162 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 DRAXINQ8NBI3 349 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-216ENST00000567023 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-216ENST00000567023 TSNAXQ99598 290 aaKnown RBP11.03□□□□□ -0.64
COMMD4-216ENST00000567023 VCX3AQ9NNX9 186 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 RDH8Q9NYR8 311 aa11.03□□□□□ -0.64
COMMD4-216ENST00000567023 ZNF256Q9Y2P7 627 aaPredicted RBP11.03□□□□□ -0.64
COMMD4-216ENST00000567023 NOTOA8MTQ0 251 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 TFAP2AP05549 437 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 LINC00205P59089 165 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 SRSF7Q16629 238 aaKnown RBP eCLIP11.02□□□□□ -0.65
COMMD4-216ENST00000567023 ACTBL2Q562R1 376 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 PPP1R27Q86WC6 154 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 DCUN1D4Q92564 292 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 RAB3CQ96E17 227 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 WWC2-AS2Q96NR7 200 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 OR5B12Q96R08 314 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 PRR25Q96S07 402 aa11.02□□□□□ -0.65
COMMD4-216ENST00000567023 METTL1Q9UBP6 276 aaKnown RBP11.02□□□□□ -0.65
COMMD4-216ENST00000567023 TRBV6-7A0A0A0MS04 114 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 RAB27BO00194 218 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 OVOL1O14753 267 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 FABP7O15540 132 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 FCGR3AP08637 254 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 LGALS1P09382 135 aaKnown RBP11.01□□□□□ -0.65
COMMD4-216ENST00000567023 CD3GP09693 182 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 RAB6AP20340 208 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 MOGAT2Q3SYC2 334 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 OR10R2Q8NGX6 335 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 DLX4Q92988 240 aaPredicted RBP11.01□□□□□ -0.65
COMMD4-216ENST00000567023 FLYWCH2Q96CP2 140 aaKnown RBP11.01□□□□□ -0.65
COMMD4-216ENST00000567023 YIPF6Q96EC8 236 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 CABLES2Q9BTV7 478 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 CENPOQ9BU64 300 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 ALX4Q9H161 411 aaPredicted RBP11.01□□□□□ -0.65
COMMD4-216ENST00000567023 SLA2Q9H6Q3 261 aa11.01□□□□□ -0.65
COMMD4-216ENST00000567023 LOC100506127A0A0U1RQW1 187 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 LINC01619G3V211 115 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 MFNGO00587 321 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 CA2P00918 260 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 APOA2P02652 100 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 GSTT2P0CG29 244 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 GSTT2BP0CG30 244 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 SMIM18P0DKX4 95 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 SNRPBP14678 240 aaKnown RBP11□□□□□ -0.65
COMMD4-216ENST00000567023 CD40LGP29965 261 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 SDC2P34741 201 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 LGALS7P47929 136 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 RPS16P62249 146 aaKnown RBP11□□□□□ -0.65
COMMD4-216ENST00000567023 MRPS15P82914 257 aaKnown RBP11□□□□□ -0.65
COMMD4-216ENST00000567023 TAGLNQ01995 201 aaKnown RBP11□□□□□ -0.65
COMMD4-216ENST00000567023 TIMM50Q3ZCQ8 353 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 IGSF11Q5DX21 431 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 UNQ5815/PRO19632Q6UWF5 114 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 Q6ZS49 121 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 LFNGQ8NES3 379 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 OR10J5Q8NHC4 309 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 CASTOR1Q8WTX7 329 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 RHOVQ96L33 236 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 FAM103A1Q9BTL3 118 aaKnown RBP11□□□□□ -0.65
COMMD4-216ENST00000567023 RNF167Q9H6Y7 350 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11□□□□□ -0.65
COMMD4-216ENST00000567023 SDHAF2Q9NX18 166 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 A3GALT2U3KPV4 340 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 NBEAL2Q6ZNJ1 2754 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 HUWE1Q7Z6Z7 4374 aaKnown RBP11□□□□□ -0.65
COMMD4-216ENST00000567023 SORL1Q92673 2214 aa11□□□□□ -0.65
COMMD4-216ENST00000567023 A0A0B4J203 849 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 SMIM30A4D0T7 59 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 M0R1X1 148 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 ARPC1BO15143 372 aaKnown RBP10.99□□□□□ -0.65
COMMD4-216ENST00000567023 BRI3O95415 125 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 HSPB1P04792 205 aaKnown RBP10.99□□□□□ -0.65
COMMD4-216ENST00000567023 CRYGBP07316 175 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 OR8U9P0C7N5 309 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 HIST1H1DP16402 221 aaKnown RBP10.99□□□□□ -0.65
COMMD4-216ENST00000567023 GNB3P16520 340 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 SSBP2P81877 361 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-216ENST00000567023 ACSM6Q6P461 480 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 SFXN4Q6P4A7 337 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 ABHD5Q8WTS1 349 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 ARPC1AQ92747 370 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 CLCC1Q96S66 551 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 SLC35D1Q9NTN3 355 aa10.99□□□□□ -0.65
COMMD4-216ENST00000567023 RYR3Q15413 4870 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 IGHV4OR15-8A0A075B7B6 117 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 A0A087WW49 117 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 METTL21EPA6NDL7 271 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 H3BUA1 57 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 BET1O15155 118 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 SLC25A17O43808 307 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 IGLV2-23P01705 113 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 CLEC2LP0C7M8 214 aa10.98□□□□□ -0.65
COMMD4-216ENST00000567023 SLURP1P55000 103 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms