RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 TMEM56-RWDD3S4R434 201 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 hADV38S2A0JD32 116 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 MARCH11A6NNE9 402 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 C17orf98A8MV24 154 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 FAM157CP0CG43 387 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 DHRS7BQ6IAN0 325 aaPredicted RBP9.8□□□□□ -0.84
CDH1-210ENST00000566612 ZNF343Q6P1L6 599 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 SLC35E3Q7Z769 313 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 HIST1H2BAQ96A08 127 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 NEIL1Q96FI4 390 aaPredicted RBP9.8□□□□□ -0.84
CDH1-210ENST00000566612 TMPRSS5Q9H3S3 457 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 SPEGQ15772 3267 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 FAM90A27PA6NNH2 459 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 EIF2S3P41091 472 aaKnown RBP9.8□□□□□ -0.84
CDH1-210ENST00000566612 SERF2P84101 59 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 C20orf204Q6ZNR8 217 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 OR13A1Q8NGR1 328 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 CRIM1Q9NZV1 1036 aa9.8□□□□□ -0.84
CDH1-210ENST00000566612 CYB5R3P00387 301 aaPredicted RBP9.79□□□□□ -0.84
CDH1-210ENST00000566612 APELAP0DMC3 54 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 LRRC10Q5BKY1 277 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 IL22RA2Q969J5 263 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 SPSB4Q96A44 273 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 SAP30LQ9HAJ7 183 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 AUP1Q9Y679 476 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 ZNF503-AS2A6NEH8 195 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 RPS2P15880 293 aaKnown RBP9.79□□□□□ -0.84
CDH1-210ENST00000566612 FAM27E3Q08E93 113 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 CORO2AQ92828 525 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 SNX22Q96L94 193 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 USF3Q68DE3 2245 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 DKK1O94907 266 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 IL3RAP26951 378 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 CD1BP29016 333 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 DTX1Q86Y01 620 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 LYPD6Q86Y78 171 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 POM121Q96HA1 1249 aa9.79□□□□□ -0.84
CDH1-210ENST00000566612 CTXND1A0A1B0GTU2 59 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 C16orf97H3BN30 126 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 NAPSAO96009 420 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 PGA5P0DJD9 388 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 SUB1P53999 127 aaKnown RBP eCLIP9.78□□□□□ -0.84
CDH1-210ENST00000566612 HOXA4Q00056 320 aaPredicted RBP9.78□□□□□ -0.84
CDH1-210ENST00000566612 TIGITQ495A1 244 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 RPL39P5Q59GN2 51 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 PRR27Q6MZM9 219 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 ACP7Q6ZNF0 438 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 MOB3BQ86TA1 216 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 ABHD12Q8N2K0 398 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 OR4D5Q8NGN0 318 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 TRAV38-1A0A0B4J264 116 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 PHOX2AO14813 284 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 ATXN7O15265 892 aaPredicted RBP9.78□□□□□ -0.84
CDH1-210ENST00000566612 RAMP3O60896 148 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 CD55P08174 381 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 FAM78BQ5VT40 261 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 ZNF251Q9BRH9 671 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 NAT8Q9UHE5 227 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 CEACAM18A8MTB9 384 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 RPL31P62899 125 aaKnown RBP9.78□□□□□ -0.84
CDH1-210ENST00000566612 ID3Q02535 119 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 PNRC1Q12796 327 aaPredicted RBP9.78□□□□□ -0.84
CDH1-210ENST00000566612 BATFQ16520 125 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 LSM10Q969L4 123 aaKnown RBP9.78□□□□□ -0.84
CDH1-210ENST00000566612 SH2D2AQ9NP31 389 aa9.78□□□□□ -0.84
CDH1-210ENST00000566612 PSPNO60542 156 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 TRGC2P03986 189 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 EGR1P18146 543 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 NPY1RP25929 384 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 OPRK1P41145 380 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 ERVFC1-1P60608 527 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 C1orf185Q5T7R7 199 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 ACSM6Q6P461 480 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 LRTM2Q8N967 370 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 OR4P4Q8NGL7 312 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 RNF138Q8WVD3 245 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 RAB24Q969Q5 203 aa9.77□□□□□ -0.84
CDH1-210ENST00000566612 TRAV20A0A0B4J274 112 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 IGHV2OR16-5A0A0B4J2B6 119 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 HPRT1P00492 218 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 HSPB1P04792 205 aaKnown RBP9.77□□□□□ -0.85
CDH1-210ENST00000566612 HOXB1P14653 301 aaPredicted RBP9.77□□□□□ -0.85
CDH1-210ENST00000566612 COX7A1P24310 79 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 B2MP61769 119 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 ZNF324BQ6AW86 544 aaPredicted RBP9.77□□□□□ -0.85
CDH1-210ENST00000566612 DAZAP1Q96EP5 407 aaKnown RBP9.77□□□□□ -0.85
CDH1-210ENST00000566612 RCC1LQ96I51 464 aaKnown RBP9.77□□□□□ -0.85
CDH1-210ENST00000566612 CALYQ9NYX4 217 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 TGIF2-C20orf24A0A0A6YYL0 155 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 PTBP3O95758 552 aaKnown RBP9.77□□□□□ -0.85
CDH1-210ENST00000566612 FABP1P07148 127 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 ADCYAP1P18509 176 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 TAS2R45P59539 299 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 MEF2BQ02080 365 aaPredicted RBP9.77□□□□□ -0.85
CDH1-210ENST00000566612 HERPUD1Q15011 391 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 GP6Q9HCN6 339 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 CACNA1BQ00975 2339 aa9.77□□□□□ -0.85
CDH1-210ENST00000566612 A0A1W2PRD5 423 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 A0A1W2PRF3 423 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms