RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 SLC23A3Q6PIS1 610 aa10.79□□□□□ -0.68
COMMD4-209ENST00000564068 QTRT1Q9BXR0 403 aaKnown RBP10.79□□□□□ -0.68
COMMD4-209ENST00000564068 OR6C3Q9NZP0 311 aa10.79□□□□□ -0.68
COMMD4-209ENST00000564068 IGKV3D-11A0A0A0MRZ8 115 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 TMEM11P17152 192 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 NUTF2P61970 127 aaKnown RBP10.78□□□□□ -0.68
COMMD4-209ENST00000564068 GTF2H5Q6ZYL4 71 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 TCF20Q9UGU0 1960 aaKnown RBP10.78□□□□□ -0.68
COMMD4-209ENST00000564068 LYZL6O75951 148 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 APCSP02743 223 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 OR4A8P0C604 315 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 OTX1P32242 354 aaPredicted RBP10.78□□□□□ -0.68
COMMD4-209ENST00000564068 FAM162BQ5T6X4 162 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 CADM4Q8NFZ8 388 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 ZCCHC14Q8WYQ9 949 aaKnown RBP10.78□□□□□ -0.68
COMMD4-209ENST00000564068 SFRP2Q96HF1 295 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 PMS2P1A4D2B8 440 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 WISP1O95388 367 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 HAND1O96004 215 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 SRIP30626 198 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 ID3Q02535 119 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 LRRC75BQ2VPJ9 315 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 OR4D5Q8NGN0 318 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 ZNF524Q96C55 264 aa10.78□□□□□ -0.68
COMMD4-209ENST00000564068 TRBV24-1A0A075B6N3 115 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 CD55P08174 381 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 ARL14EPLP0DKL9 152 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 DEFA4P12838 97 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 SELEP16581 610 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 TCTAP57738 103 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 IGFBP7Q16270 282 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 ZNF718Q3SXZ3 478 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 C6orf15Q6UXA7 325 aaPredicted RBP10.77□□□□□ -0.68
COMMD4-209ENST00000564068 CARFQ8N187 725 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 ZNF525Q8N782 197 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 OR2Z1Q8NG97 314 aa10.77□□□□□ -0.68
COMMD4-209ENST00000564068 PARD6GQ9BYG4 376 aaPredicted RBP10.77□□□□□ -0.68
COMMD4-209ENST00000564068 SLC25A5P05141 298 aaKnown RBP10.77□□□□□ -0.69
COMMD4-209ENST00000564068 RTL8BQ17RB0 113 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 TGIF2LYQ8IUE0 185 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 OR1L1Q8NH94 360 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 GATAD1Q8WUU5 269 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 RAB29O14966 203 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 GZMBP10144 247 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 ATP5G3P48201 142 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 CEBPDP49716 269 aaPredicted RBP10.77□□□□□ -0.69
COMMD4-209ENST00000564068 SUB1P53999 127 aaKnown RBP eCLIP10.77□□□□□ -0.69
COMMD4-209ENST00000564068 LEMD1Q68G75 181 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 WDFY1Q8IWB7 410 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 TMEM170AQ8WVE7 144 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 CHRDL1Q9BU40 450 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 SH3BGRL2Q9UJC5 107 aa10.77□□□□□ -0.69
COMMD4-209ENST00000564068 C3orf80F5H4A9 247 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 LYL1P12980 280 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 RPL24P83731 157 aaKnown RBP10.76□□□□□ -0.69
COMMD4-209ENST00000564068 HGFACQ04756 655 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 PQLC2Q6ZP29 291 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 ERASQ7Z444 233 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 FAM216AQ8WUB2 273 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 OR2J1Q9GZK6 312 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 WNT5BQ9H1J7 359 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 TMEM167BQ9NRX6 74 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 EREGO14944 169 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 C1QTNF9P0C862 333 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 ZNF137PP52743 207 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 NHLH1Q02575 133 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 FA2HQ7L5A8 372 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 MMD2Q8IY49 270 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 DRAM1Q8N682 238 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 ZDHHC16Q969W1 377 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 TMEM56Q96MV1 263 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 GSX1Q9H4S2 264 aaPredicted RBP10.76□□□□□ -0.69
COMMD4-209ENST00000564068 TMEM56-RWDD3S4R434 201 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 TANC1Q9C0D5 1861 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 NLRC5Q86WI3 1866 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 S1PR2O95136 353 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 OR2H2O95918 312 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 IL3RAP26951 378 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 OR4A47Q6IF82 309 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 TEPPQ6URK8 271 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 NHLRC2Q8NBF2 726 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 WDYHV1Q96HA8 205 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 WIPF3A6NGB9 483 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 NPY1RP25929 384 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 BPIFB3P59826 476 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 TFF3Q07654 80 aa10.76□□□□□ -0.69
COMMD4-209ENST00000564068 WDR74Q6RFH5 385 aaPredicted RBP10.76□□□□□ -0.69
COMMD4-209ENST00000564068 EFNA2O43921 213 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 SERF1AO75920 110 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 TIAF1O95411 115 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 NAPSAO96009 420 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 HTR1DP28221 377 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 OPRK1P41145 380 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 LCN2P80188 198 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 PRSS3P2Q8NHM4 247 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 LRRC29Q8WV35 223 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 C2orf88Q9BSF0 95 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 SRXN1Q9BYN0 137 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 TMEM191AQ9H0A3 160 aa10.75□□□□□ -0.69
COMMD4-209ENST00000564068 IGKV1-12A0A0C4DH73 117 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms