RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 AKAIN1P0CW23 69 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 RRASP10301 218 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 DUTP33316 252 aaKnown RBP13.07□□□□□ -0.32
USB1-206ENST00000562534 FXYD4P59646 89 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 ZNF79Q15937 498 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 Q8N6K4 173 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 GDPD1Q8N9F7 314 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 ZNF383Q8NA42 475 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 OR4C13Q8NGP0 309 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 HSD17B10Q99714 261 aaKnown RBP13.07□□□□□ -0.32
USB1-206ENST00000562534 PRSS22Q9GZN4 317 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 C16orf95Q9H693 158 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 BEX1Q9HBH7 125 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 CCL28Q9NRJ3 127 aa13.07□□□□□ -0.32
USB1-206ENST00000562534 ANKRD20A5PA0PJZ0 165 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 NCBP2LA6PVI3 153 aaKnown RBP13.06□□□□□ -0.32
USB1-206ENST00000562534 FGF16O43320 207 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 IGLV2-14P01704 120 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 RAG2P55895 527 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 UCP3P55916 312 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 AP3S2P59780 193 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 CBX3Q13185 183 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 GLDNQ6ZMI3 551 aaPredicted RBP13.06□□□□□ -0.32
USB1-206ENST00000562534 ZNF66Q6ZN08 573 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 Q6ZSV7 163 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 PDPNQ86YL7 162 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 TINAGL1Q9GZM7 467 aaPredicted RBP13.06□□□□□ -0.32
USB1-206ENST00000562534 PTTG2Q9NZH5 202 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 MOB4Q9Y3A3 225 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 PRELID3BQ9Y3B1 194 aa13.06□□□□□ -0.32
USB1-206ENST00000562534 DISC1C4P0D8 188 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 GNRHRP30968 328 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 LINC00205P59089 165 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 BLCAPP62952 87 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 RELBQ01201 579 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 RTL8BQ17RB0 113 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 C11orf88Q6PI97 169 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 CMTM1Q8IZ96 169 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 TOMM5Q8N4H5 51 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 TERB2Q8NHR7 220 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 DEDD2Q8WXF8 326 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 FLYWCH2Q96CP2 140 aaKnown RBP13.05□□□□□ -0.32
USB1-206ENST00000562534 MDFIQ99750 246 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 SRRQ9GZT4 340 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 PLSCR3Q9NRY6 295 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 SLC35D1Q9NTN3 355 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 MMP24Q9Y5R2 645 aa13.05□□□□□ -0.32
USB1-206ENST00000562534 AMY2AP04746 511 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 S100GP29377 79 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 LGALS7P47929 136 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 COMPP49747 757 aaPredicted RBP13.04□□□□□ -0.32
USB1-206ENST00000562534 RPS16P62249 146 aaKnown RBP13.04□□□□□ -0.32
USB1-206ENST00000562534 FBLN7Q53RD9 439 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 BVESQ8NE79 360 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 NPBQ8NG41 125 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 OR2T6Q8NHC8 308 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 S100ZQ8WXG8 99 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 C5orf30Q96GV9 206 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 RASL11BQ9BPW5 248 aa13.04□□□□□ -0.32
USB1-206ENST00000562534 ATRQ13535 2644 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 CLPSL1A2RUU4 121 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 LINC00473A8K010 186 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 GPR31O00270 319 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 AMY1AP04745 511 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 FAUP35544 74 aaKnown RBP13.03□□□□□ -0.32
USB1-206ENST00000562534 ECI1P42126 302 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 F2RL1P55085 397 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 EIF4EBP1Q13541 118 aaPredicted RBP13.03□□□□□ -0.32
USB1-206ENST00000562534 MMDQ15546 238 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 ABCA11PQ4W5N1 156 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 AADACL3Q5VUY0 350 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 ZNF818PQ6ZRF7 136 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 KCTD9Q7L273 389 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 LHFPL1Q86WI0 220 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 SLC38A6Q8IZM9 456 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 Q8N2B8 174 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 C5orf56Q8N8D9 126 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 OR4D10Q8NGI6 311 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 LINC01006Q8NI28 216 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 DDB2Q92466 427 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 RITA1Q96K30 269 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 TSNAXQ99598 290 aaKnown RBP13.03□□□□□ -0.32
USB1-206ENST00000562534 RSRP1Q9BUV0 290 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 KIAA1456Q9P272 454 aa13.03□□□□□ -0.32
USB1-206ENST00000562534 NBR2O15453 112 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 IGKV1-16P04430 117 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 ZNF735P0CB33 412 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 KIR2DS2P43631 304 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 INPP1P49441 399 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 CATR1Q13166 79 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 SCGB2B2Q4G0G5 96 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 Q8N9W7 124 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 OR4C16Q8NGL9 310 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 ZFAND1Q8TCF1 268 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 TCTEX1D2Q8WW35 142 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 TAF15Q92804 592 aaKnown RBP eCLIP13.02□□□□□ -0.33
USB1-206ENST00000562534 TRIM63Q969Q1 353 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 PRRT1Q99946 306 aa13.02□□□□□ -0.33
USB1-206ENST00000562534 LIN7CQ9NUP9 197 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms