RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 POLR3KQ9Y2Y1 108 aaPredicted RBP11.67□□□□□ -0.54
COMMD4-205ENST00000562310 COL12A1Q99715 3063 aa11.67□□□□□ -0.54
COMMD4-205ENST00000562310 TRAV14DV4A0A0A6YYC5 116 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 A0A1B0GU03 582 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 MPTX1A8MV57 137 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 PROP1O75360 226 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 MPC2O95563 127 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 C4BPBP20851 252 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 PRTN3P24158 256 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 IL15RAQ13261 267 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 SMCO1Q147U7 214 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 NCR3LG1Q68D85 454 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 DHRS7BQ6IAN0 325 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-205ENST00000562310 C11orf87Q6NUJ2 197 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 OR11H4Q8NGC9 324 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 DDB2Q92466 427 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 NRGNQ92686 78 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 WDR89Q96FK6 387 aaPredicted RBP11.66□□□□□ -0.54
COMMD4-205ENST00000562310 HEXA-AS1Q9H8Q6 139 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
COMMD4-205ENST00000562310 PLEKHA2Q9HB19 425 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 GSKIPQ9P0R6 139 aa11.66□□□□□ -0.54
COMMD4-205ENST00000562310 FXYD6-FXYD2A0A087WZ82 144 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 TXNL1O43396 289 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 S1PR2O95136 353 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 HPRT1P00492 218 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 IGKV1-39P01597 117 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 IGLV1-47P01700 117 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 APOA2P02652 100 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 IGKV1D-39P04432 117 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 RRASP10301 218 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 ZFP36P26651 326 aaKnown RBP11.65□□□□□ -0.54
COMMD4-205ENST00000562310 PAX2Q02962 417 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 ZNF816Q0VGE8 651 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-205ENST00000562310 RTL8BQ17RB0 113 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 HLA-DRB5Q30154 266 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 LRRC37A5PQ49AS3 106 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 Q5BKY6 102 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 OR2B11Q5JQS5 317 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 TMEM65Q6PI78 240 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 C9orf62Q8N4C0 152 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 Q8N7P7 452 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 MBD6Q96DN6 1003 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 PCGF1Q9BSM1 259 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 MMP24Q9Y5R2 645 aa11.65□□□□□ -0.54
COMMD4-205ENST00000562310 ARID1AO14497 2285 aa11.65□□□□□ -0.55
COMMD4-205ENST00000562310 IGHV4-30-2A0A087WSY4 118 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 RAMP3O60896 148 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 FCGR3BO75015 233 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 IGKV1-5P01602 117 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 RLN2P04090 185 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 ARHGDIBP52566 201 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 S100A10P60903 97 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 ERVK-16P61578 105 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 ARF6P62330 175 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 LCN2P80188 198 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 CLEC12BQ2HXU8 276 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 DEFB113Q30KQ7 82 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 PRSS54Q6PEW0 395 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 OR4D5Q8NGN0 318 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 ST6GALNAC6Q969X2 333 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 COA4Q9NYJ1 87 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 MBD2Q9UBB5 411 aa11.64□□□□□ -0.55
COMMD4-205ENST00000562310 DOPEY2Q9Y3R5 2298 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 ST8SIA3O43173 380 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 LYL1P12980 280 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 COX7A1P24310 79 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 BRWD1-AS2P59051 145 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 RAB32Q13637 225 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 ZNF546Q86UE3 836 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 TGIF2LXQ8IUE1 241 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 PNKDQ8N490 385 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 ZNF383Q8NA42 475 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 DRAXINQ8NBI3 349 aaPredicted RBP11.63□□□□□ -0.55
COMMD4-205ENST00000562310 OR1S1Q8NH92 325 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 GRPEL2Q8TAA5 225 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 R3HDM4Q96D70 268 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 AIFM2Q9BRQ8 373 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 MRPL20Q9BYC9 149 aaKnown RBP11.63□□□□□ -0.55
COMMD4-205ENST00000562310 SIRPDQ9H106 197 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 HSPB11Q9Y547 144 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 POMT1Q9Y6A1 747 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 DCHS2Q6V1P9 2916 aa11.63□□□□□ -0.55
COMMD4-205ENST00000562310 MARCH11A6NNE9 402 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 L7N2F9 121 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 ARPC5O15511 151 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 DEDDO75618 318 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 SCGB1D2O95969 90 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 HRASP01112 189 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 P0C879 139 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 CT45A6P0DMU7 189 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 CT45A5P0DMU8 189 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 CT45A7P0DMV0 189 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 NQO2P16083 231 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 EPHA1P21709 976 aa11.62□□□□□ -0.55
COMMD4-205ENST00000562310 USF1P22415 310 aaPredicted RBP11.62□□□□□ -0.55
COMMD4-205ENST00000562310 NUP62P37198 522 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms