RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 ZNF79Q15937 498 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 FAM131AQ6UXB0 335 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 LHFPL1Q86WI0 220 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 PDPNQ86YL7 162 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 OR6Q1Q8NGQ2 317 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 FCAMRQ8WWV6 532 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 ADTRPQ96IZ2 230 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 ZNF747Q9BV97 191 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 LIN7CQ9NUP9 197 aaKnown RBP10.66□□□□□ -0.7
CDH1-204ENST00000562118 WASHC3Q9Y3C0 194 aa10.66□□□□□ -0.7
CDH1-204ENST00000562118 VWFP04275 2813 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 LINC00473A8K010 186 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 IGKV1-16P04430 117 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 THBS3P49746 956 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 F2RL1P55085 397 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 LINC00205P59089 165 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 LINC00299Q6ZSB3 139 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 ZBTB34Q8NCN2 500 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 OR5H2Q8NGV7 314 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 TRIM63Q969Q1 353 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 RITA1Q96K30 269 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 PRSS22Q9GZN4 317 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 FXYD6Q9H0Q3 95 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 EHFQ9NZC4 300 aa10.65□□□□□ -0.7
CDH1-204ENST00000562118 M0R1X1 148 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 SPDEFO95238 335 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 IGHG2P01859 326 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 PMP2P02689 132 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 HLA-DMAP28067 261 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 UCP3P55916 312 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 BRWD1-AS2P59051 145 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 KRTAP10-3P60369 221 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 IL18Q14116 193 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 HES1Q14469 280 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 TMEM177Q53S58 311 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 AADACL3Q5VUY0 350 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 GLDNQ6ZMI3 551 aaPredicted RBP10.64□□□□□ -0.71
CDH1-204ENST00000562118 ARRDC1Q8N5I2 433 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 DRAXINQ8NBI3 349 aaPredicted RBP10.64□□□□□ -0.71
CDH1-204ENST00000562118 BVESQ8NE79 360 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 RBMXL1Q96E39 390 aaKnown RBP10.64□□□□□ -0.71
CDH1-204ENST00000562118 HSD17B10Q99714 261 aaKnown RBP10.64□□□□□ -0.71
CDH1-204ENST00000562118 CITED1Q99966 193 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 RNF114Q9Y508 228 aa10.64□□□□□ -0.71
CDH1-204ENST00000562118 ANKRD20A5PA0PJZ0 165 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 FABP12A6NFH5 140 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 IGLV2-23P01705 113 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 HLA-DRB1P01911 266 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 CD3DP04234 171 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 FCER2P06734 321 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 ZNF735P0CB33 412 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 RRASP10301 218 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 GNRHRP30968 328 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 TAS2R19P59542 299 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 ZNF66Q6ZN08 573 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 OR2T6Q8NHC8 308 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 ZNF2Q9BSG1 426 aaPredicted RBP10.63□□□□□ -0.71
CDH1-204ENST00000562118 BATF3Q9NR55 127 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
CDH1-204ENST00000562118 NBR2O15453 112 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 RBFOX2O43251 390 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDH1-204ENST00000562118 APOA2P02652 100 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 CRYGBP07316 175 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 CSF1P09603 554 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 CNTFRP26992 372 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 S100A5P33763 92 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 CRIP2P52943 208 aaPredicted RBP10.62□□□□□ -0.71
CDH1-204ENST00000562118 RPL30P62888 115 aaKnown RBP10.62□□□□□ -0.71
CDH1-204ENST00000562118 HNF4GQ14541 408 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 C5orf64Q2M2E5 130 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 ABCA11PQ4W5N1 156 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 ZNF818PQ6ZRF7 136 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 OR4D10Q8NGI6 311 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 DEDD2Q8WXF8 326 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 BORCS5Q969J3 196 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 MRGPRFQ96AM1 343 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 RSRP1Q9BUV0 290 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 TINAGL1Q9GZM7 467 aaPredicted RBP10.62□□□□□ -0.71
CDH1-204ENST00000562118 SRRQ9GZT4 340 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 SLC35D1Q9NTN3 355 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 SLC2A8Q9NY64 477 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 TAS2R8Q9NYW2 309 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 SIGLEC9Q9Y336 463 aa10.62□□□□□ -0.71
CDH1-204ENST00000562118 RRHO14718 337 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 IGF1P05019 195 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 MMDQ15546 238 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 MRGPRG-AS1Q2M3A8 158 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 RNASE10Q5GAN6 216 aaKnown RBP10.61□□□□□ -0.71
CDH1-204ENST00000562118 STEAP1BQ6NZ63 245 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 MFSD4AQ8N468 514 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 OR6F1Q8NGZ6 308 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 SECTM1Q8WVN6 248 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 SDHCQ99643 169 aaPredicted RBP10.61□□□□□ -0.71
CDH1-204ENST00000562118 SLC5A7Q9GZV3 580 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 CCL28Q9NRJ3 127 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 RBM7Q9Y580 266 aaKnown RBP10.61□□□□□ -0.71
CDH1-204ENST00000562118 PLXNB1O43157 2135 aa10.61□□□□□ -0.71
CDH1-204ENST00000562118 SRRM4A7MD48 611 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms