RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 ZNF660Q6AZW8 331 aaPredicted RBP19.6■□□□□ 0.73
NME3-202ENST00000561637 OR1N2Q8NGR9 330 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 UBE2E2Q96LR5 201 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 PRR25Q96S07 402 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 CHCHD6Q9BRQ6 235 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 OR2D2Q9H210 308 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 TXNL4BQ9NX01 149 aaKnown RBP19.6■□□□□ 0.73
NME3-202ENST00000561637 SCOCQ9UIL1 159 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 VSIG4Q9Y279 399 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 NUBP2Q9Y5Y2 271 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 DNAH7Q8WXX0 4024 aa19.6■□□□□ 0.73
NME3-202ENST00000561637 SEC14L6B5MCN3 397 aa19.59■□□□□ 0.73
NME3-202ENST00000561637 CA2P00918 260 aa19.59■□□□□ 0.73
NME3-202ENST00000561637 TFAP2AP05549 437 aa19.59■□□□□ 0.73
NME3-202ENST00000561637 RAB6AP20340 208 aa19.59■□□□□ 0.73
NME3-202ENST00000561637 CRIP2P52943 208 aaPredicted RBP19.59■□□□□ 0.73
NME3-202ENST00000561637 TOLLIPQ9H0E2 274 aa19.59■□□□□ 0.73
NME3-202ENST00000561637 SDHAF2Q9NX18 166 aa19.59■□□□□ 0.73
NME3-202ENST00000561637 TRBV6-7A0A0A0MS04 114 aa19.58■□□□□ 0.72
NME3-202ENST00000561637 SLC25A17O43808 307 aa19.58■□□□□ 0.72
NME3-202ENST00000561637 RBBP9O75884 186 aa19.58■□□□□ 0.72
NME3-202ENST00000561637 RPS16P62249 146 aaKnown RBP19.58■□□□□ 0.72
NME3-202ENST00000561637 SSBP2P81877 361 aaPredicted RBP19.58■□□□□ 0.72
NME3-202ENST00000561637 MRPS15P82914 257 aaKnown RBP19.58■□□□□ 0.72
NME3-202ENST00000561637 DGCR2P98153 550 aa19.58■□□□□ 0.72
NME3-202ENST00000561637 PPP1R27Q86WC6 154 aa19.58■□□□□ 0.72
NME3-202ENST00000561637 ATG5Q9H1Y0 275 aa19.58■□□□□ 0.72
NME3-202ENST00000561637 RNF167Q9H6Y7 350 aa19.58■□□□□ 0.72
NME3-202ENST00000561637 FOXA2Q9Y261 457 aaPredicted RBP19.58■□□□□ 0.72
NME3-202ENST00000561637 ARPC1BO15143 372 aaKnown RBP19.57■□□□□ 0.72
NME3-202ENST00000561637 CLEC2LP0C7M8 214 aa19.57■□□□□ 0.72
NME3-202ENST00000561637 GADD45AP24522 165 aa19.57■□□□□ 0.72
NME3-202ENST00000561637 PJVKQ0ZLH3 352 aa19.57■□□□□ 0.72
NME3-202ENST00000561637 OR51E2Q9H255 320 aa19.57■□□□□ 0.72
NME3-202ENST00000561637 GHITMQ9H3K2 345 aa19.57■□□□□ 0.72
NME3-202ENST00000561637 SLC35D1Q9NTN3 355 aa19.57■□□□□ 0.72
NME3-202ENST00000561637 MRPS14O60783 128 aaKnown RBP19.56■□□□□ 0.72
NME3-202ENST00000561637 IGLV2-23P01705 113 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 GALP22466 123 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 SLURP1P55000 103 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 RUNX1Q01196 453 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 DCTN2Q13561 401 aaKnown RBP19.56■□□□□ 0.72
NME3-202ENST00000561637 ARFRP1Q13795 201 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 C9orf66Q5T8R8 295 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 UNQ5815/PRO19632Q6UWF5 114 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 LFNGQ8NES3 379 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 OR10J5Q8NHC4 309 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 MS4A10Q96PG2 267 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 GAR1Q9NY12 217 aaKnown RBP19.56■□□□□ 0.72
NME3-202ENST00000561637 STUB1Q9UNE7 303 aa19.56■□□□□ 0.72
NME3-202ENST00000561637 IGHV3-11P01762 117 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 APOA2P02652 100 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 SERPINB10P48595 397 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 ZNF616Q08AN1 781 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 ZNF260Q3ZCT1 412 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 PDPNQ86YL7 162 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 GRPEL2Q8TAA5 225 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 DCUN1D4Q92564 292 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 TSNAXQ99598 290 aaKnown RBP19.55■□□□□ 0.72
NME3-202ENST00000561637 RNF5Q99942 180 aa19.55■□□□□ 0.72
NME3-202ENST00000561637 NOTOA8MTQ0 251 aa19.54■□□□□ 0.72
NME3-202ENST00000561637 J3QRK9 145 aa19.54■□□□□ 0.72
NME3-202ENST00000561637 FGF9P31371 208 aaPredicted RBP19.54■□□□□ 0.72
NME3-202ENST00000561637 ECI1P42126 302 aa19.54■□□□□ 0.72
NME3-202ENST00000561637 CDNFQ49AH0 187 aa19.54■□□□□ 0.72
NME3-202ENST00000561637 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.54■□□□□ 0.72
NME3-202ENST00000561637 NUDCD2Q8WVJ2 157 aa19.54■□□□□ 0.72
NME3-202ENST00000561637 DAPK2Q9UIK4 370 aa19.54■□□□□ 0.72
NME3-202ENST00000561637 LSM4Q9Y4Z0 139 aaKnown RBP19.54■□□□□ 0.72
NME3-202ENST00000561637 IGHV4OR15-8A0A075B7B6 117 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 A0A087WW49 117 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 ACTBL2Q562R1 376 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 ZNF773Q6PK81 442 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 ZNF562Q6V9R5 426 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 H1FOOQ8IZA3 346 aaPredicted RBP19.53■□□□□ 0.72
NME3-202ENST00000561637 BVESQ8NE79 360 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 LGALS14Q8TCE9 139 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 ARPC1AQ92747 370 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 FLYWCH2Q96CP2 140 aaKnown RBP19.53■□□□□ 0.72
NME3-202ENST00000561637 ASCL2Q99929 193 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 RRP15Q9Y3B9 282 aaKnown RBP19.53■□□□□ 0.72
NME3-202ENST00000561637 TNCP24821 2201 aa19.53■□□□□ 0.72
NME3-202ENST00000561637 METTL21EPA6NDL7 271 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 TMEM235A6NFC5 223 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 SRRM4A7MD48 611 aaKnown RBP19.52■□□□□ 0.72
NME3-202ENST00000561637 SPDEFO95238 335 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 CRYGBP07316 175 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 OR8U8P0C7N1 319 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 TALDO1P37837 337 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 RANBP1P43487 201 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 DEFA5Q01523 94 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 MXD1Q05195 221 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 FXYD3Q14802 87 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 CASC10Q5T4H9 136 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 DLX4Q92988 240 aaPredicted RBP19.52■□□□□ 0.72
NME3-202ENST00000561637 GINS4Q9BRT9 223 aa19.52■□□□□ 0.72
NME3-202ENST00000561637 DNAH1Q9P2D7 4330 aa19.51■□□□□ 0.71
NME3-202ENST00000561637 SORL1Q92673 2214 aa19.51■□□□□ 0.71
NME3-202ENST00000561637 LGALS1P09382 135 aaKnown RBP19.51■□□□□ 0.71
NME3-202ENST00000561637 SDC2P34741 201 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms