RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 HAGHLQ6PII5 290 aaPredicted RBP5.6□□□□□ -1.51
SPG11-224ENST00000561268 FIP1L1Q6UN15 594 aaKnown RBP5.6□□□□□ -1.51
SPG11-224ENST00000561268 GLIPR1L1Q6UWM5 242 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 DHRS11Q6UWP2 260 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 TCF23Q7RTU1 214 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 ZNF573Q86YE8 665 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 CALHM1Q8IU99 346 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 FAM185AQ8N0U4 392 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 CD177Q8N6Q3 437 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 ZSCAN4Q8NAM6 433 aaPredicted RBP5.6□□□□□ -1.51
SPG11-224ENST00000561268 BEND2Q8NDZ0 799 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 Q8NFD4 153 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 DMBX1Q8NFW5 382 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 OR5H2Q8NGV7 314 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 PPP1R14AQ96A00 147 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 RNF126Q9BV68 326 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 SELENOIQ9C0D9 397 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 SLC5A7Q9GZV3 580 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 FAM234AQ9H0X4 552 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 ARV1Q9H2C2 271 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 C16orf95Q9H693 158 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 ELL3Q9HB65 397 aaPredicted RBP5.6□□□□□ -1.51
SPG11-224ENST00000561268 SIRT7Q9NRC8 400 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 CYTL1Q9NRR1 136 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 C19orf12Q9NSK7 152 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 C14orf166Q9Y224 244 aaKnown RBP5.6□□□□□ -1.51
SPG11-224ENST00000561268 PIGLQ9Y2B2 252 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 VWFP04275 2813 aa5.6□□□□□ -1.51
SPG11-224ENST00000561268 CLPSL1A2RUU4 121 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 ODF3BA8MYP8 253 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 TSPAN4O14817 238 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 IFNA21P01568 189 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 APOC3P02656 99 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 IFNA4P05014 189 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 CD5P06127 495 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 SEC11BP0C7V7 166 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 VAMP1P23763 118 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 HAAOP46952 286 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 DLX1P56177 255 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 KRTAP10-3P60369 221 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 SUPT4H1P63272 117 aaKnown RBP5.59□□□□□ -1.51
SPG11-224ENST00000561268 SMCO1Q147U7 214 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 CNN3Q15417 329 aaKnown RBP5.59□□□□□ -1.51
SPG11-224ENST00000561268 KISS1Q15726 138 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 UBE2V2Q15819 145 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 PLAC9Q5JTB6 97 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 AADACL3Q5VUY0 350 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 Q6ZSV7 163 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 SGPP2Q8IWX5 399 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 CHST4Q8NCG5 386 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 ZNRF1Q8ND25 227 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 LFNGQ8NES3 379 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 OR5D13Q8NGL4 314 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 OR13C9Q8NGT0 318 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 OR5R1Q8NH85 324 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 LINC01006Q8NI28 216 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 TAF15Q92804 592 aaKnown RBP eCLIP5.59□□□□□ -1.51
SPG11-224ENST00000561268 TMEM230Q96A57 120 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 TSNAXQ99598 290 aaKnown RBP5.59□□□□□ -1.51
SPG11-224ENST00000561268 RTBDNQ9BSG5 229 aaPredicted RBP5.59□□□□□ -1.51
SPG11-224ENST00000561268 MEGF9Q9H1U4 602 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 RHOFQ9HBH0 211 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 ONECUT1Q9UBC0 465 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 KCNIP3Q9Y2W7 256 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 PRKDCP78527 4128 aaKnown RBP5.59□□□□□ -1.51
SPG11-224ENST00000561268 MEGF8Q7Z7M0 2845 aa5.59□□□□□ -1.51
SPG11-224ENST00000561268 NOTCH1P46531 2555 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 A0A0A6YYD4 124 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 IGKV1-9A0A0C4DH69 117 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 SCO2A0A1W2PP80 73 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 MEIS3P1A6NDR6 274 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 C5orf51A6NDU8 294 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 BTBD17A6NE02 478 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 CRYM-AS1A6NIL9 109 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 C17orf98A8MV24 154 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 E5RGE8 158 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 K7N7A8 449 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 TK1P04183 234 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 HCKP08631 526 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 PGAM2P15259 253 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 IL13RA2Q14627 380 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 ODF4Q2M2E3 257 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 DMRTC1Q5HYR2 192 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 TMEM268Q5VZI3 342 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 LHFPL2Q6ZUX7 228 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 KCTD9Q7L273 389 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 COMMD2Q86X83 199 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 ARL6IP6Q8N6S5 226 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 BPIFCQ8NFQ6 507 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 OR4S1Q8NGB4 309 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 MARCH1Q8TCQ1 289 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 NUDCD2Q8WVJ2 157 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 DCUN1D4Q92564 292 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 NARS2Q96I59 477 aaKnown RBP5.58□□□□□ -1.52
SPG11-224ENST00000561268 Q96M66 194 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 ZNF488Q96MN9 340 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 HIST1H2AAQ96QV6 131 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 S100A13Q99584 98 aa5.58□□□□□ -1.52
SPG11-224ENST00000561268 GPR173Q9NS66 373 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms