RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 CHCHD7Q9BUK0 85 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 PBOV1Q9GZY1 135 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 TMEM126AQ9H061 195 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 RNASE7Q9H1E1 156 aaKnown RBP1.49□□□□□ -2.17
RTF1-207ENST00000561076 MED29Q9NX70 200 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 C21orf62Q9NYP8 219 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 TVP23BQ9NYZ1 205 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 CKLFQ9UBR5 152 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 ANAPC10Q9UM13 185 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 LAMTOR2Q9Y2Q5 125 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 ASB4Q9Y574 426 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 TMEM14AQ9Y6G1 99 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 ADAMTS12P58397 1594 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 CUX1P39880 1505 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 ERICH3Q5RHP9 1530 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 KDM5BQ9UGL1 1544 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 DENND4BO75064 1496 aaPredicted RBP1.49□□□□□ -2.17
RTF1-207ENST00000561076 PRDM2Q13029 1718 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 DCCP43146 1447 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 MIA2Q96PC5 1412 aa1.49□□□□□ -2.17
RTF1-207ENST00000561076 CARMIL3Q8ND23 1372 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 LTBP4Q8N2S1 1624 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 MAP3K4Q9Y6R4 1608 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 TRBV20OR9-2A0A075B6H5 130 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 TMED7-TICAM2A0A0A6YYA0 188 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 CCL15-CCL14A0A0B4J2E2 113 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 KLF18A0A0U1RQI7 1052 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 TMEM223A0PJW6 202 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 C5orf63A6NC05 138 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 PRORSD1PA6NEY8 169 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 EPM2AB3EWF7 344 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 INMT-MINDY4F8WBC2 141 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 TMEM250H0YL14 139 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 M0R381 172 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 ISLRO14498 428 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 COX7A2LO14548 114 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 BPY2O14599 106 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 RBFOX2O43251 390 aaKnown RBP eCLIP1.48□□□□□ -2.17
RTF1-207ENST00000561076 MFSD11O43934 449 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 GCM2O75603 506 aaPredicted RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 IGLV2-23P01705 113 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 IGHMP01871 453 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 HLA-DQA1P01909 254 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 HLA-DQB1P01920 261 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 APOC1P02654 83 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 SLPIP03973 132 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 BPGMP07738 259 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 S100A4P26447 101 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 CASP1P29466 404 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 CMPK1P30085 196 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 G6PCP35575 357 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 AKR1C3P42330 323 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 ZNF133P52736 654 aaPredicted RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 ZNF136P52737 540 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 PIGPP57054 158 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 DEFA3P59666 94 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 CKS1BP61024 79 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 PSPHP78330 225 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 DEFA6Q01524 100 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 DAZ2Q13117 558 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 BAMBIQ13145 260 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 APOFQ13790 326 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 CCL15Q16663 113 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 NDUFA5Q16718 116 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 C15orf32Q32M92 178 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 SMIM21Q3B7S5 101 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 TMEM78Q5T7P6 136 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 ZFAND6Q6FIF0 208 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 AGTRAPQ6RW13 159 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 Q6ZS49 121 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 TCF24Q7RTU0 167 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 SCXQ7RTU7 201 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 DAZ4Q86SG3 579 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 ZNF429Q86V71 674 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 ANGPTL5Q86XS5 388 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 ZNF440Q8IYI8 595 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 RNF175Q8N4F7 328 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 LINC00337Q8N6G1 96 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 KRTCAP2Q8N6L1 136 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 OR2M3Q8NG83 312 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 OR5W2Q8NH69 310 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 SLC25A40Q8TBP6 338 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 MRPL30Q8TCC3 161 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 RBPMSQ93062 196 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 ISOC1Q96CN7 298 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 NARS2Q96I59 477 aaKnown RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 CAPZA3Q96KX2 299 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 DNAJC30Q96LL9 226 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 AP1S3Q96PC3 154 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 LYSMD1Q96S90 227 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 CCL13Q99616 98 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 NRTNQ99748 197 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 NDFIP1Q9BT67 221 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 C1orf50Q9BV19 199 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 MS4A8Q9BY19 250 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 SAMD10Q9BYL1 202 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 IMUPQ9GZP8 106 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 CHST6Q9GZX3 395 aa1.48□□□□□ -2.17
RTF1-207ENST00000561076 ALX4Q9H161 411 aaPredicted RBP1.48□□□□□ -2.17
RTF1-207ENST00000561076 CACYBPQ9HB71 228 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms