RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 BMPR1BO00238 502 aa13.93□□□□□ -0.18
TPM1-226ENST00000560959 ATF4P18848 351 aaPredicted RBP13.93□□□□□ -0.18
TPM1-226ENST00000560959 SLC16A13Q7RTY0 426 aa13.93□□□□□ -0.18
TPM1-226ENST00000560959 C6orf201Q7Z4U5 140 aa13.93□□□□□ -0.18
TPM1-226ENST00000560959 WFDC3Q8IUB2 231 aa13.93□□□□□ -0.18
TPM1-226ENST00000560959 DYNLRB2Q8TF09 96 aa13.93□□□□□ -0.18
TPM1-226ENST00000560959 COA4Q9NYJ1 87 aa13.93□□□□□ -0.18
TPM1-226ENST00000560959 A0A1W2PPK0 400 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 FAM223BA6NKX1 122 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 NDUFB8O95169 186 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 TNFRSF9Q07011 255 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 FAM223AQ8IWN6 122 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 CBR4Q8N4T8 237 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.92□□□□□ -0.18
TPM1-226ENST00000560959 ADAD2Q8NCV1 583 aaKnown RBP13.92□□□□□ -0.18
TPM1-226ENST00000560959 THRSPQ92748 146 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 DERL3Q96Q80 235 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 WFDC10AQ9H1F0 79 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 CHMP1AQ9HD42 196 aaPredicted RBP13.92□□□□□ -0.18
TPM1-226ENST00000560959 SLC35D1Q9NTN3 355 aa13.92□□□□□ -0.18
TPM1-226ENST00000560959 KLK5Q9Y337 293 aaPredicted RBP13.92□□□□□ -0.18
TPM1-226ENST00000560959 EXOSC1Q9Y3B2 195 aaKnown RBP13.92□□□□□ -0.18
TPM1-226ENST00000560959 HECTD4Q9Y4D8 3996 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 TRBV9A0A0B4J1U6 114 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 RBMXL2O75526 392 aaKnown RBP13.91□□□□□ -0.18
TPM1-226ENST00000560959 MYL12AP19105 171 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 LINC00205P59089 165 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 RPS27AP62979 156 aaKnown RBP13.91□□□□□ -0.18
TPM1-226ENST00000560959 DEFA5Q01523 94 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 TAGLNQ01995 201 aaKnown RBP13.91□□□□□ -0.18
TPM1-226ENST00000560959 GUCA2BQ16661 112 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 GGTLC1Q9BX51 225 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 TM2D1Q9BX74 207 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 OR1A1Q9P1Q5 309 aa13.91□□□□□ -0.18
TPM1-226ENST00000560959 DIMT1Q9UNQ2 313 aaKnown RBP13.91□□□□□ -0.18
TPM1-226ENST00000560959 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.9□□□□□ -0.18
TPM1-226ENST00000560959 MSGN1A6NI15 193 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 C2orf70A6NJV1 201 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 LGALS9O00182 355 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 CD1AP06126 327 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 OR9G9P0C7N8 305 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 FOLR2P14207 255 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 HTR2CP28335 458 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 ATP5G2Q06055 141 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 RPP25LQ8N5L8 163 aaKnown RBP13.9□□□□□ -0.18
TPM1-226ENST00000560959 ZNF485Q8NCK3 441 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 ZNF230Q9UIE0 474 aaPredicted RBP13.9□□□□□ -0.18
TPM1-226ENST00000560959 TP53TG1Q9Y2A0 90 aa13.9□□□□□ -0.18
TPM1-226ENST00000560959 LOC102724200A0A096LPH7 203 aaPredicted RBP13.89□□□□□ -0.19
TPM1-226ENST00000560959 WBP4O75554 376 aaKnown RBP13.89□□□□□ -0.19
TPM1-226ENST00000560959 TUSC2O75896 110 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 TAS2R43P59537 309 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 HLA-DRB3P79483 266 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 RHOGP84095 191 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 MED21Q13503 144 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 PMS2P11Q13670 270 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 SMN1Q16637 294 aaKnown RBP13.89□□□□□ -0.19
TPM1-226ENST00000560959 KCNG3Q8TAE7 436 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 SETD6Q8TBK2 473 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 PYDC1Q8WXC3 89 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 PHB2Q99623 299 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 TMEM59Q9BXS4 323 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 AKIP1Q9NQ31 210 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 PLEKHJ1Q9NW61 149 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 CLEC2DQ9UHP7 191 aa13.89□□□□□ -0.19
TPM1-226ENST00000560959 DYNC1I1O14576 645 aa13.88□□□□□ -0.19
TPM1-226ENST00000560959 ATP5HO75947 161 aa13.88□□□□□ -0.19
TPM1-226ENST00000560959 MAPK3P27361 379 aaPredicted RBP13.88□□□□□ -0.19
TPM1-226ENST00000560959 EXOSC2Q13868 293 aaKnown RBP13.88□□□□□ -0.19
TPM1-226ENST00000560959 MRGPRG-AS1Q2M3A8 158 aa13.88□□□□□ -0.19
TPM1-226ENST00000560959 ANKRD55Q3KP44 614 aa13.88□□□□□ -0.19
TPM1-226ENST00000560959 TMEM177Q53S58 311 aa13.88□□□□□ -0.19
TPM1-226ENST00000560959 LGALS9CQ6DKI2 356 aa13.88□□□□□ -0.19
TPM1-226ENST00000560959 TEX45Q8NA69 505 aa13.88□□□□□ -0.19
TPM1-226ENST00000560959 WDR89Q96FK6 387 aaPredicted RBP13.88□□□□□ -0.19
TPM1-226ENST00000560959 HARBI1Q96MB7 349 aa13.88□□□□□ -0.19
TPM1-226ENST00000560959 A0A0J9YWU9 116 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 M0R1X1 148 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 CIB2O75838 187 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 BMI1P35226 326 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 MAP2K4P45985 399 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 CBX3Q13185 183 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 C1orf100Q5SVJ3 147 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 GLT8D1Q68CQ7 371 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 OR10K2Q6IF99 312 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 GPHB5Q86YW7 130 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 ZFP41Q8N8Y5 198 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 NECAP1Q8NC96 275 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 C9orf16Q9BUW7 83 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 DMRT1Q9Y5R6 373 aa13.87□□□□□ -0.19
TPM1-226ENST00000560959 SRRM4A7MD48 611 aaKnown RBP13.86□□□□□ -0.19
TPM1-226ENST00000560959 SHOXO15266 292 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 GGCTO75223 188 aaKnown RBP13.86□□□□□ -0.19
TPM1-226ENST00000560959 SCTP09683 121 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 RRASP10301 218 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 CBLN1P23435 193 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 TTC23Q5W5X9 447 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 ZFP1Q6P2D0 407 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 Q6ZWC4 215 aa13.86□□□□□ -0.19
TPM1-226ENST00000560959 TMEM80Q96HE8 168 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms