RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 SLC2A9Q9NRM0 540 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 TNFRSF19Q9NS68 423 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 LIN7CQ9NUP9 197 aaKnown RBP9.58□□□□□ -0.88
LDLR-212ENST00000560467 PRELID3BQ9Y3B1 194 aa9.58□□□□□ -0.88
LDLR-212ENST00000560467 A0A087X0M5 115 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 A0A1B0GX30 115 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 J3QR06 171 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 ST8SIA5O15466 376 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 HOXA3O43365 443 aaPredicted RBP9.57□□□□□ -0.88
LDLR-212ENST00000560467 PI3P19957 117 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 ARHGDIBP52566 201 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 DLX6P56179 175 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 RND3P61587 244 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 TAGLNQ01995 201 aaKnown RBP9.57□□□□□ -0.88
LDLR-212ENST00000560467 PAX2Q02962 417 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 ZNF66Q6ZN08 573 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 C9orf139Q6ZV77 190 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 TCF23Q7RTU1 214 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 C5orf24Q7Z6I8 188 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 LYG2Q86SG7 212 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 TCTEX1D1Q8N7M0 179 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 CD300LFQ8TDQ1 290 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 ZNF431Q8TF32 576 aaPredicted RBP9.57□□□□□ -0.88
LDLR-212ENST00000560467 CASTOR1Q8WTX7 329 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 LEAP2Q969E1 77 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 RTBDNQ9BSG5 229 aaPredicted RBP9.57□□□□□ -0.88
LDLR-212ENST00000560467 PCGF1Q9BSM1 259 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 FXYD6Q9H0Q3 95 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 NAA60Q9H7X0 242 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 GAB2Q9UQC2 676 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 MMP24Q9Y5R2 645 aa9.57□□□□□ -0.88
LDLR-212ENST00000560467 C3orf85A0A1B0GTC6 90 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 PFDN1O60925 122 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 PGLYRP1O75594 196 aaPredicted RBP9.56□□□□□ -0.88
LDLR-212ENST00000560467 SFT2D2O95562 160 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 IFNA21P01568 189 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 IGHV3-7P01780 117 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 COX7A1P24310 79 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 CD34P28906 385 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 KIR2DS2P43631 304 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 DEFB112Q30KQ8 113 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 CT45A1Q5HYN5 189 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 BRD3OSQ6XYD6 125 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 ZNF818PQ6ZRF7 136 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 SLC25A48Q6ZT89 311 aaKnown RBP9.56□□□□□ -0.88
LDLR-212ENST00000560467 TBC1D26Q86UD7 250 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 LGI3Q8N145 548 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 C12orf45Q8N5I9 185 aaPredicted RBP9.56□□□□□ -0.88
LDLR-212ENST00000560467 LINC00311Q8N616 119 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 CT45A3Q8NHU0 189 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 TCTEX1D2Q8WW35 142 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 AIFM2Q9BRQ8 373 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 ALG5Q9Y673 324 aa9.56□□□□□ -0.88
LDLR-212ENST00000560467 IGHV2-26A0A0B4J1V2 119 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 IGKV1D-13A0A0B4J2D9 117 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 C9orf170A2RU37 121 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 CRYM-AS1A6NIL9 109 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 LEUTXA8MZ59 168 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 M0R1X1 148 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 TXNL1O43396 289 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 TNFSF12O43508 249 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 FCN3O75636 299 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 MMP23AO75900 390 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 DUS4LO95620 317 aaKnown RBP9.55□□□□□ -0.88
LDLR-212ENST00000560467 GAPDHP04406 335 aaKnown RBP9.55□□□□□ -0.88
LDLR-212ENST00000560467 ARG1P05089 322 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 IGKV1-13P0DP09 117 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 F2RP25116 425 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 HTR1DP28221 377 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 THBS3P49746 956 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 RELBQ01201 579 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 DHRS2Q13268 280 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 PPP1R1AQ13522 171 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 RTL8BQ17RB0 113 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 CCDC144NLQ6NUI1 221 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 FAM71F2Q6NXP2 309 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 VMO1Q7Z5L0 202 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 ZNF695Q8IW36 515 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 PNKDQ8N490 385 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 DRAM1Q8N682 238 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 ADAD2Q8NCV1 583 aaKnown RBP9.55□□□□□ -0.88
LDLR-212ENST00000560467 BEND2Q8NDZ0 799 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 RNASE11Q8TAA1 199 aaKnown RBP9.55□□□□□ -0.88
LDLR-212ENST00000560467 RPEQ96AT9 228 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 ABHD14BQ96IU4 210 aa9.55□□□□□ -0.88
LDLR-212ENST00000560467 A0A0B4J2A0 478 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 A0A1W2PPE3 182 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 C7orf66A4D0T2 115 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 H0Y980 276 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 APOA2P02652 100 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 RRASP10301 218 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 RPA2P15927 270 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 KRTAP10-3P60369 221 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 ZNF626Q68DY1 528 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 TGIF2LXQ8IUE1 241 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 OR11H6Q8NGC7 330 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 OR4F5Q8NH21 305 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 OR51H1Q8NH63 302 aa9.54□□□□□ -0.88
LDLR-212ENST00000560467 CAPSLQ8WWF8 208 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms