RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 OVOL1O14753 267 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 BET1O15155 118 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 CNIH1O95406 144 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 CTXN2P0C2S0 81 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 DTYMKP23919 212 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 PSMB9P28065 219 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 ECI1P42126 302 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 LUMP51884 338 aaPredicted RBP10.96□□□□□ -0.65
TPM1-223ENST00000560445 PITPNAQ00169 270 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 PSG5Q15238 335 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 MOGAT2Q3SYC2 334 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 PLAC9Q5JTB6 97 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 UBE2UQ5VVX9 321 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 UNQ5815/PRO19632Q6UWF5 114 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 GLDNQ6ZMI3 551 aaPredicted RBP10.96□□□□□ -0.65
TPM1-223ENST00000560445 Q6ZS49 121 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 TPRA1Q86W33 373 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 SPARTQ8N0X7 666 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 OR2D2Q9H210 308 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.65
TPM1-223ENST00000560445 A3GALT2U3KPV4 340 aa10.96□□□□□ -0.65
TPM1-223ENST00000560445 TRBV6-7A0A0A0MS04 114 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 MFNGO00587 321 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 SLC22A5O76082 557 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 OR8U9P0C7N5 309 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 C22orf42Q6IC83 251 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 C5orf24Q7Z6I8 188 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 OR6Q1Q8NGQ2 317 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 RITA1Q96K30 269 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 PARP12Q9H0J9 701 aaKnown RBP10.95□□□□□ -0.66
TPM1-223ENST00000560445 ATG5Q9H1Y0 275 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 KLK15Q9H2R5 256 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 GNB4Q9HAV0 340 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 SSR3Q9UNL2 185 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 NUBP2Q9Y5Y2 271 aa10.95□□□□□ -0.66
TPM1-223ENST00000560445 NOTOA8MTQ0 251 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 CA2P00918 260 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 ZP3P21754 424 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 FGF9P31371 208 aaPredicted RBP10.94□□□□□ -0.66
TPM1-223ENST00000560445 SCAND1P57086 179 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 TPPP2P59282 170 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 NDPQ00604 133 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 FXYD3Q14802 87 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 VMA21Q3ZAQ7 101 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 C19orf54Q5BKX5 351 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 ZNF383Q8NA42 475 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 DRAXINQ8NBI3 349 aaPredicted RBP10.94□□□□□ -0.66
TPM1-223ENST00000560445 HARBI1Q96MB7 349 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 ELOVL1Q9BW60 279 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 DCSTAMPQ9H295 470 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 STUB1Q9UNE7 303 aa10.94□□□□□ -0.66
TPM1-223ENST00000560445 A0A075B6Q4 140 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 IGKV1-6A0A0C4DH72 117 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 C13orf42A0A1B0GVH6 325 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 RAB27BO00194 218 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 SHOXO15266 292 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 SLC25A17O43808 307 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 TMEM127O75204 238 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 ACTL6BO94805 426 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 LY86O95711 162 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 IGKV1-16P04430 117 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 HSPB1P04792 205 aaKnown RBP10.93□□□□□ -0.66
TPM1-223ENST00000560445 GNB3P16520 340 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 CD36P16671 472 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 AADACP22760 399 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 OR10A3P58181 314 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 GNB1P62873 340 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 POC5Q8NA72 575 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 GRPEL2Q8TAA5 225 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 CYYR1Q96J86 154 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 WWC2-AS2Q96NR7 200 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 OR5B12Q96R08 314 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 OR4C12Q96R67 309 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 CLCC1Q96S66 551 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 ZNF355PQ9NSJ1 428 aa10.93□□□□□ -0.66
TPM1-223ENST00000560445 MRPS7Q9Y2R9 242 aaKnown RBP10.93□□□□□ -0.66
TPM1-223ENST00000560445 SAP30O75446 220 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 BRI3O95415 125 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 TRGV3P03979 118 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 KIAA0141Q14154 515 aaPredicted RBP10.92□□□□□ -0.66
TPM1-223ENST00000560445 TMEM177Q53S58 311 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 FAM209BQ5JX69 171 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 ZNF773Q6PK81 442 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 LFNGQ8NES3 379 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 OSR1Q8TAX0 266 aaPredicted RBP10.92□□□□□ -0.66
TPM1-223ENST00000560445 DCUN1D4Q92564 292 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 RANGRFQ9HD47 186 aaPredicted RBP10.92□□□□□ -0.66
TPM1-223ENST00000560445 TXNL4BQ9NX01 149 aaKnown RBP10.92□□□□□ -0.66
TPM1-223ENST00000560445 SDHAF2Q9NX18 166 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 KCNK7Q9Y2U2 307 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 PRELID3BQ9Y3B1 194 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 SMAD5-AS1Q9Y6J3 95 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 DNAH3Q8TD57 4116 aa10.92□□□□□ -0.66
TPM1-223ENST00000560445 SORL1Q92673 2214 aa10.91□□□□□ -0.66
TPM1-223ENST00000560445 GSTT2P0CG29 244 aa10.91□□□□□ -0.66
TPM1-223ENST00000560445 GSTT2BP0CG30 244 aa10.91□□□□□ -0.66
TPM1-223ENST00000560445 GNG2P59768 71 aa10.91□□□□□ -0.66
TPM1-223ENST00000560445 TATDN3Q17R31 274 aa10.91□□□□□ -0.66
TPM1-223ENST00000560445 IGSF11Q5DX21 431 aa10.91□□□□□ -0.66
TPM1-223ENST00000560445 HACD4Q5VWC8 232 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms