RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 EHFQ9NZC4 300 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 NDUFA13Q9P0J0 144 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 MTFP1Q9UDX5 166 aa13.34□□□□□ -0.27
RPL28-209ENST00000560055 J3QRK9 145 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 RBBP9O75884 186 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 NDUFA3O95167 84 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 IGHG2P01859 326 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 PMP2P02689 132 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 CNTFRP26992 372 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 HLA-DMAP28067 261 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 TNFSF8P32971 234 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 HRH1P35367 487 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 EIF4EBP1Q13541 118 aaPredicted RBP13.33□□□□□ -0.28
RPL28-209ENST00000560055 MMDQ15546 238 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 MSMO1Q15800 293 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 PYHIN1Q6K0P9 492 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 PDPNQ86YL7 162 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 DGCR14Q96DF8 476 aaKnown RBP13.33□□□□□ -0.28
RPL28-209ENST00000560055 RNF5Q99942 180 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 MMP27Q9H306 513 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 RABL2AQ9UBK7 228 aaPredicted RBP13.33□□□□□ -0.28
RPL28-209ENST00000560055 KLK11Q9UBX7 282 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 RABL2BQ9UNT1 228 aa13.33□□□□□ -0.28
RPL28-209ENST00000560055 RBMX2Q9Y388 322 aaKnown RBP13.33□□□□□ -0.28
RPL28-209ENST00000560055 LINC00473A8K010 186 aa13.32□□□□□ -0.28
RPL28-209ENST00000560055 GABARAPH6UMI1 98 aa13.32□□□□□ -0.28
RPL28-209ENST00000560055 CTDSPLO15194 276 aa13.32□□□□□ -0.28
RPL28-209ENST00000560055 NBR2O15453 112 aa13.32□□□□□ -0.28
RPL28-209ENST00000560055 APOA2P02652 100 aa13.32□□□□□ -0.28
RPL28-209ENST00000560055 THBS3P49746 956 aa13.32□□□□□ -0.28
RPL28-209ENST00000560055 MRPS10P82664 201 aaKnown RBP13.32□□□□□ -0.28
RPL28-209ENST00000560055 DGCR2P98153 550 aa13.32□□□□□ -0.28
RPL28-209ENST00000560055 TAGLNQ01995 201 aaKnown RBP13.32□□□□□ -0.28
RPL28-209ENST00000560055 ADTRPQ96IZ2 230 aa13.32□□□□□ -0.28
RPL28-209ENST00000560055 MGAM2Q2M2H8 2515 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 H7C2Y5 167 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 C5orf64Q2M2E5 130 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 RNASE12Q5GAN4 147 aaKnown RBP13.31□□□□□ -0.28
RPL28-209ENST00000560055 C9orf152Q5JTZ5 239 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 VAX1Q5SQQ9 334 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 SMIM4Q8WVI0 70 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 SECTM1Q8WVN6 248 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 FCAMRQ8WWV6 532 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 MOB3AQ96BX8 217 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 RASL11BQ9BPW5 248 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 SLC35D1Q9NTN3 355 aa13.31□□□□□ -0.28
RPL28-209ENST00000560055 VSIG10L2P0DP72 767 aa13.3□□□□□ -0.28
RPL28-209ENST00000560055 RPL30P62888 115 aaKnown RBP13.3□□□□□ -0.28
RPL28-209ENST00000560055 SSBP1Q04837 148 aaKnown RBP13.3□□□□□ -0.28
RPL28-209ENST00000560055 IL18Q14116 193 aa13.3□□□□□ -0.28
RPL28-209ENST00000560055 ACTBL2Q562R1 376 aa13.3□□□□□ -0.28
RPL28-209ENST00000560055 ARSJQ5FYB0 599 aaPredicted RBP13.3□□□□□ -0.28
RPL28-209ENST00000560055 HSD17B10Q99714 261 aaKnown RBP13.3□□□□□ -0.28
RPL28-209ENST00000560055 HSPB9Q9BQS6 159 aa13.3□□□□□ -0.28
RPL28-209ENST00000560055 ZNF2Q9BSG1 426 aaPredicted RBP13.3□□□□□ -0.28
RPL28-209ENST00000560055 CCL28Q9NRJ3 127 aa13.3□□□□□ -0.28
RPL28-209ENST00000560055 ZNF107Q9UII5 783 aaPredicted RBP13.3□□□□□ -0.28
RPL28-209ENST00000560055 LINC01548A6NM66 108 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 RRHO14718 337 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 SPDEFO95238 335 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 HLA-DRB1P01911 266 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 RRASP10301 218 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 TBPP20226 339 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 GNRHRP30968 328 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 FXYD4P59646 89 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 HERV-K104P61576 105 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 TMEM177Q53S58 311 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 SLC35E3Q7Z769 313 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 ZBTB34Q8NCN2 500 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 BVESQ8NE79 360 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 OR6F1Q8NGZ6 308 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 FLYWCH2Q96CP2 140 aaKnown RBP13.29□□□□□ -0.28
RPL28-209ENST00000560055 SLC5A7Q9GZV3 580 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 FXYD6Q9H0Q3 95 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 KIAA1456Q9P272 454 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 V9GYH0 126 aa13.29□□□□□ -0.28
RPL28-209ENST00000560055 FABP12A6NFH5 140 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 KCNAB3O43448 404 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 GSTZ1O43708 216 aaPredicted RBP13.28□□□□□ -0.28
RPL28-209ENST00000560055 PEX14O75381 377 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 IGLV2-23P01705 113 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 CD74P04233 296 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 PSG5Q15238 335 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 RTL8BQ17RB0 113 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 ZNF66Q6ZN08 573 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 ZNF818PQ6ZRF7 136 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 KCTD9Q7L273 389 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 CCDC190Q86UF4 302 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 TMEM17Q86X19 198 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 TMEM229BQ8NBD8 167 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 TSNAXQ99598 290 aaKnown RBP13.28□□□□□ -0.28
RPL28-209ENST00000560055 FBXL15Q9H469 300 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 ZNF580Q9UK33 172 aa13.28□□□□□ -0.28
RPL28-209ENST00000560055 VWFP04275 2813 aa13.27□□□□□ -0.28
RPL28-209ENST00000560055 PLXNB1O43157 2135 aa13.27□□□□□ -0.28
RPL28-209ENST00000560055 IGHV7-81A0A0B4J1V7 117 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 SRRM4A7MD48 611 aaKnown RBP13.27□□□□□ -0.29
RPL28-209ENST00000560055 M0QYG6 137 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 CD3DP04234 171 aa13.27□□□□□ -0.29
RPL28-209ENST00000560055 LGALS7P47929 136 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms