RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 A3GALT2U3KPV4 340 aa11.63□□□□□ -0.55
RABGGTA-211ENST00000559850 NOTCH1P46531 2555 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 IGKV1D-13A0A0B4J2D9 117 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 SLC25A17O43808 307 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 DIRAS3O95661 229 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 IGF1P05019 195 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 IGKV1-13P0DP09 117 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 DEFB136Q30KP8 78 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 SAMD5Q5TGI4 173 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 TEX38Q6PEX7 206 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 ETV3LQ6ZN32 361 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 PDPNQ86YL7 162 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 BEST4Q8NFU0 473 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 CASTOR1Q8WTX7 329 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 S100A16Q96FQ6 103 aaKnown RBP11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 FAM103A1Q9BTL3 118 aaKnown RBP11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 COMMD3Q9UBI1 195 aa11.62□□□□□ -0.55
RABGGTA-211ENST00000559850 A0A0A6YYH2 397 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 TRAV41A0A0B4J266 112 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 A6NJ64 397 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 LINC00473A8K010 186 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 XRCC3O43542 346 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 RBBP9O75884 186 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 CA2P00918 260 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 IGLL1P15814 213 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 CD33P20138 364 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 LUMP51884 338 aaPredicted RBP11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 TAS2R20P59543 309 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 ARPC4P59998 168 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 CX3CL1P78423 397 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 CTF1Q16619 201 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 BEAN1Q3B7T3 259 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 OR2B11Q5JQS5 317 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 TMEM69Q5SWH9 247 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 HOGA1Q86XE5 327 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 COMMD1Q8N668 190 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 SNAPC3Q92966 411 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 FLYWCH2Q96CP2 140 aaKnown RBP11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 GPHA2Q96T91 129 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 GON7Q9BXV9 100 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 MRPS26Q9BYN8 205 aaKnown RBP11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 KLK15Q9H2R5 256 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 OR2W1Q9Y3N9 320 aa11.61□□□□□ -0.55
RABGGTA-211ENST00000559850 HPGDSO60760 199 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 TUSC2O75896 110 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 GABARAPO95166 117 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 IGLV2-14P01704 120 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 IGLV2-23P01705 113 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 IGHG4P01861 327 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 HLA-DQB1P01920 261 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 CTXN2P0C2S0 81 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 EGR2P11161 476 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 PPIFP30405 207 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 DUTP33316 252 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 THBS3P49746 956 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 FOXE3Q13461 319 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 CXorf66Q5JRM2 361 aaPredicted RBP11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 ANKRD13BQ86YJ7 626 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 ZNF695Q8IW36 515 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 DDB2Q92466 427 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 TSNAXQ99598 290 aaKnown RBP11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 ZFP57Q9NU63 452 aa11.6□□□□□ -0.55
RABGGTA-211ENST00000559850 SRRM4A7MD48 611 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 TMEM127O75204 238 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 AADACP22760 399 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 PSMB8P28062 276 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 FCGR2CP31995 323 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 ALDH3B2P48448 385 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 GNB1P62873 340 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 RPL30P62888 115 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 PJVKQ0ZLH3 352 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 MRPL41Q8IXM3 137 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 ZNF645Q8N7E2 425 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 LINC00482Q8N8I6 264 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 HARBI1Q96MB7 349 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 RNF5Q99942 180 aa11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 RBMX2Q9Y388 322 aaKnown RBP11.59□□□□□ -0.55
RABGGTA-211ENST00000559850 A0A1W2PN81 502 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 ARPC1BO15143 372 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 SHOXO15266 292 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 SOX15O60248 233 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 CRYZL1O95825 349 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 ELANEP08246 267 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 ELK1P19419 428 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 CHRNA7P36544 502 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 RAB25P57735 213 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 RTL8BQ17RB0 113 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 TMEM177Q53S58 311 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 C19orf54Q5BKX5 351 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 ZNF660Q6AZW8 331 aaPredicted RBP11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 GPR141Q7Z602 305 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 PPP1R27Q86WC6 154 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 GRPEL2Q8TAA5 225 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 KCTD12Q96CX2 325 aaKnown RBP11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 OR5B12Q96R08 314 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 GNB4Q9HAV0 340 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 IFT46Q9NQC8 304 aa11.58□□□□□ -0.56
RABGGTA-211ENST00000559850 CCL28Q9NRJ3 127 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms