RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 SAV1Q9H4B6 383 aaPredicted RBP11.71□□□□□ -0.54
RABGGTA-209ENST00000559551 LPAR3Q9UBY5 353 aa11.71□□□□□ -0.54
RABGGTA-209ENST00000559551 SHPKQ9UHJ6 478 aa11.71□□□□□ -0.54
RABGGTA-209ENST00000559551 RBM7Q9Y580 266 aaKnown RBP11.71□□□□□ -0.54
RABGGTA-209ENST00000559551 C17orf98A8MV24 154 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 VWC2LB2RUY7 222 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 OR2F2O95006 317 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 PDLIM4P50479 330 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 PRB3Q04118 309 aaPredicted RBP11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 OR2F1Q13607 317 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 BTNL3Q6UXE8 466 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 ZNF546Q86UE3 836 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 KCNRGQ8N5I3 272 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 CCDC71LQ8N9Z2 235 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 C10orf105Q8TEF2 133 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 AKR1E2Q96JD6 320 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 SSBP3Q9BWW4 388 aaPredicted RBP11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 CSMD1Q96PZ7 3565 aa11.7□□□□□ -0.54
RABGGTA-209ENST00000559551 ZNF98A6NK75 572 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 FAM74A7A6NL05 159 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 GPR37O15354 613 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 F2RP25116 425 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 GNG10P50151 68 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 GNB2P62879 340 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 RPL39P5Q59GN2 51 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 OR10A7Q8NGE5 316 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 OR51H1Q8NH63 302 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 RBMXL1Q96E39 390 aaKnown RBP11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 ZNF251Q9BRH9 671 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 TMEM222Q9H0R3 208 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 BARX1Q9HBU1 254 aaPredicted RBP11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 PPIAL4CA0A0B4J2A2 164 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 RAB19A4D1S5 217 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 LINC00473A8K010 186 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 ITGB1BP1O14713 200 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 BCL2L11O43521 198 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 PPIAL4GP0DN37 164 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 IGHV1-8P0DP01 117 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 SLC25A4P12235 298 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 PAX2Q02962 417 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 LIAT1Q6ZQX7 453 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 CMTM1Q8IZ96 169 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 Q8N7P7 452 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 EDARADDQ8WWZ3 215 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 ABHD14AQ9BUJ0 271 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 ITPR2Q14571 2701 aa11.69□□□□□ -0.54
RABGGTA-209ENST00000559551 IGHV4-30-2A0A087WSY4 118 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 TRAV14DV4A0A0A6YYC5 116 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 ATG12O94817 140 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 IGKV1-39P01597 117 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 IGKV1D-39P04432 117 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 UCP1P25874 307 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 SRSF4Q08170 494 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 Q3ZCU0 254 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 ZNF585BQ52M93 769 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 SLC25A48Q6ZT89 311 aaKnown RBP11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 LRTM2Q8N967 370 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 FAM168AQ92567 244 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 C18orf12Q96KH6 178 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 OR10C1Q96KK4 312 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 SUCNR1Q9BXA5 334 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 MLXQ9UH92 298 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 SVEP1Q4LDE5 3571 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 MAST4O15021 2626 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 PDZD2O15018 2839 aa11.68□□□□□ -0.54
RABGGTA-209ENST00000559551 A0A087X0M5 115 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 IGHV4-61A0A0C4DH41 118 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 A0A1B0GX30 115 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 HOXB5P09067 269 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 LYZL2Q7Z4W2 148 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 SVBPQ8N300 66 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 NARS2Q96I59 477 aaKnown RBP11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 SEC22AQ96IW7 307 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 RAB9BQ9NP90 201 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 KCNIP3Q9Y2W7 256 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 SAA2-SAA4A0A096LPE2 208 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 H0Y980 276 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 SAA2P0DJI9 122 aaPredicted RBP11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 MSMO1Q15800 293 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 TMEM30BQ3MIR4 351 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 FAM219AQ8IW50 185 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 SELENOHQ8IZQ5 122 aaKnown RBP11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 TMEM56Q96MV1 263 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 RAB18Q9NP72 206 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 COMMD9Q9P000 198 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 TMEM56-RWDD3S4R434 201 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 CR1P17927 2039 aa11.67□□□□□ -0.54
RABGGTA-209ENST00000559551 UNC79Q9P2D8 2635 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 LOC105371242A0A075B767 164 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 FAM157AC9JC47 383 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 CDS2O95674 445 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 GPR12P47775 334 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 GGNBP1Q5YKI7 109 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 ZBTB34Q8NCN2 500 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 ZNF596Q8TC21 504 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 MMP26Q9NRE1 261 aa11.66□□□□□ -0.54
RABGGTA-209ENST00000559551 TNFSF18Q9UNG2 199 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms