RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 SCAND1P57086 179 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 LINC00205P59089 165 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 GNG2P59768 71 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 PITPNAQ00169 270 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 DEFB136Q30KP8 78 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 TIMM50Q3ZCQ8 353 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 DEFB121Q5J5C9 76 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 H1FOOQ8IZA3 346 aaPredicted RBP9.85□□□□□ -0.83
LRRC28-214ENST00000559433 OR5H6Q8NGV6 325 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 ABHD5Q8WTS1 349 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 RAX2Q96IS3 184 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 DUX3Q96PT4 197 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 TSNAXQ99598 290 aaKnown RBP9.85□□□□□ -0.83
LRRC28-214ENST00000559433 RNF5Q99942 180 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 SDHAF2Q9NX18 166 aa9.85□□□□□ -0.83
LRRC28-214ENST00000559433 METTL1Q9UBP6 276 aaKnown RBP9.85□□□□□ -0.83
LRRC28-214ENST00000559433 AIREO43918 545 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 SPDEFO95238 335 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 CDX1P47902 265 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-214ENST00000559433 RPS16P62249 146 aaKnown RBP9.84□□□□□ -0.83
LRRC28-214ENST00000559433 NDPQ00604 133 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 TMEM267Q0VDI3 215 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-214ENST00000559433 CBX3Q13185 183 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 PSG5Q15238 335 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 ECSCRQ19T08 205 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 ZNF260Q3ZCT1 412 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 ZNF660Q6AZW8 331 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-214ENST00000559433 FLYWCH2Q96CP2 140 aaKnown RBP9.84□□□□□ -0.83
LRRC28-214ENST00000559433 SLC25A38Q96DW6 304 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 CLCC1Q96S66 551 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 DCSTAMPQ9H295 470 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 SLC35D1Q9NTN3 355 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 AURKAIP1Q9NWT8 199 aaPredicted RBP9.84□□□□□ -0.83
LRRC28-214ENST00000559433 GAB2Q9UQC2 676 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 FBXO7Q9Y3I1 522 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 A3GALT2U3KPV4 340 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 DNAH3Q8TD57 4116 aa9.84□□□□□ -0.83
LRRC28-214ENST00000559433 TRAV18A0A075B6X5 111 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 FCN1O00602 326 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 SSX5O60225 188 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 CD40LGP29965 261 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 PPIFP30405 207 aaKnown RBP9.83□□□□□ -0.84
LRRC28-214ENST00000559433 TGFBR1P36897 503 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 CX3CL1P78423 397 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 C4orf3Q8WVX3 66 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 YIPF6Q96EC8 236 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 C5orf30Q96GV9 206 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 P2RX4Q99571 388 aa9.83□□□□□ -0.84
LRRC28-214ENST00000559433 A0A0A6YYH2 397 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 A0A1W2PN81 502 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 A6NJ64 397 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 J3QRK9 145 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 SLC25A17O43808 307 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 CA2P00918 260 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 IGLV1-40P01703 118 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 CHRNA7P36544 502 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 CRIP2P52943 208 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-214ENST00000559433 LSM3P62310 102 aaKnown RBP9.82□□□□□ -0.84
LRRC28-214ENST00000559433 RTL8BQ17RB0 113 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 PPP1R27Q86WC6 154 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 CROCCP3Q8IVE0 287 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 MINDY2Q8NBR6 621 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 BVESQ8NE79 360 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 OR5M8Q8NGP6 311 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 MYOZ3Q8TDC0 251 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 HARBI1Q96MB7 349 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 KLK15Q9H2R5 256 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 TPSG1Q9NRR2 321 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 FOXA2Q9Y261 457 aaPredicted RBP9.82□□□□□ -0.84
LRRC28-214ENST00000559433 VSIG4Q9Y279 399 aa9.82□□□□□ -0.84
LRRC28-214ENST00000559433 TMEM127O75204 238 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 CTXN2P0C2S0 81 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 EGR2P11161 476 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-214ENST00000559433 NFYAP23511 347 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-214ENST00000559433 HOXD3P31249 432 aaPredicted RBP9.81□□□□□ -0.84
LRRC28-214ENST00000559433 GNB1P62873 340 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 TAGLNQ01995 201 aaKnown RBP9.81□□□□□ -0.84
LRRC28-214ENST00000559433 C19orf54Q5BKX5 351 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 CNIH2Q6PI25 160 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 UNQ5815/PRO19632Q6UWF5 114 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 ZNF645Q8N7E2 425 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 TCTEX1D1Q8N7M0 179 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 ZNF491Q8N8L2 437 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 ARPC1AQ92747 370 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 ADTRPQ96IZ2 230 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 UBE2E2Q96LR5 201 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 FAM103A1Q9BTL3 118 aaKnown RBP9.81□□□□□ -0.84
LRRC28-214ENST00000559433 GNB4Q9HAV0 340 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 DIABLOQ9NR28 239 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 ANXA10Q9UJ72 324 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 SPATA2Q9UM82 520 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 OR2W1Q9Y3N9 320 aa9.81□□□□□ -0.84
LRRC28-214ENST00000559433 SHOXO15266 292 aa9.8□□□□□ -0.84
LRRC28-214ENST00000559433 CNIH1O95406 144 aa9.8□□□□□ -0.84
LRRC28-214ENST00000559433 IGLV2-23P01705 113 aa9.8□□□□□ -0.84
LRRC28-214ENST00000559433 RRASP10301 218 aa9.8□□□□□ -0.84
LRRC28-214ENST00000559433 DUTP33316 252 aaKnown RBP9.8□□□□□ -0.84
LRRC28-214ENST00000559433 RPS19P39019 145 aaKnown RBP9.8□□□□□ -0.84
LRRC28-214ENST00000559433 LGALS7P47929 136 aa9.8□□□□□ -0.84
LRRC28-214ENST00000559433 RAB9AP51151 201 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms