RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 MRPL41Q8IXM3 137 aaKnown RBP6.42□□□□□ -1.38
SNX1-207ENST00000559401 H1FOOQ8IZA3 346 aaPredicted RBP6.42□□□□□ -1.38
SNX1-207ENST00000559401 LINC00482Q8N8I6 264 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 BVESQ8NE79 360 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 GRPEL2Q8TAA5 225 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 FLYWCH2Q96CP2 140 aaKnown RBP6.42□□□□□ -1.38
SNX1-207ENST00000559401 SLC25A38Q96DW6 304 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 RCC1LQ96I51 464 aaKnown RBP6.42□□□□□ -1.38
SNX1-207ENST00000559401 HARBI1Q96MB7 349 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 OR5B12Q96R08 314 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 FAM103A1Q9BTL3 118 aaKnown RBP6.42□□□□□ -1.38
SNX1-207ENST00000559401 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.42□□□□□ -1.38
SNX1-207ENST00000559401 DIABLOQ9NR28 239 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 NECAP2Q9NVZ3 263 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 SDHAF2Q9NX18 166 aa6.42□□□□□ -1.38
SNX1-207ENST00000559401 CCL24O00175 119 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 FCN1O00602 326 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 SHOXO15266 292 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 SPDEFO95238 335 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 CNIH1O95406 144 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 DUS4LO95620 317 aaKnown RBP6.41□□□□□ -1.38
SNX1-207ENST00000559401 CA2P00918 260 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 CTXN2P0C2S0 81 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 CDX1P47902 265 aaPredicted RBP6.41□□□□□ -1.38
SNX1-207ENST00000559401 LUMP51884 338 aaPredicted RBP6.41□□□□□ -1.38
SNX1-207ENST00000559401 NDPQ00604 133 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 CFHR3Q02985 330 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 SRSF7Q16629 238 aaKnown RBP eCLIP6.41□□□□□ -1.38
SNX1-207ENST00000559401 OR2B11Q5JQS5 317 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 KPRPQ5T749 579 aaPredicted RBP6.41□□□□□ -1.38
SNX1-207ENST00000559401 ZNF660Q6AZW8 331 aaPredicted RBP6.41□□□□□ -1.38
SNX1-207ENST00000559401 UNQ5815/PRO19632Q6UWF5 114 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 Q6ZS49 121 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 REC114Q7Z4M0 266 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 PPP1R27Q86WC6 154 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 CROCCP3Q8IVE0 287 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 WFDC9Q8NEX5 89 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 BEST4Q8NFU0 473 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 MRAPQ8TCY5 172 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 YIPF6Q96EC8 236 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 RAX2Q96IS3 184 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 RNF5Q99942 180 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 DCUN1D5Q9BTE7 237 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 GPR61Q9BZJ8 451 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 TOLLIPQ9H0E2 274 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 DCSTAMPQ9H295 470 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 TPSG1Q9NRR2 321 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 ANXA10Q9UJ72 324 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 SPATA2Q9UM82 520 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 GAB2Q9UQC2 676 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 FBXO7Q9Y3I1 522 aa6.41□□□□□ -1.38
SNX1-207ENST00000559401 A0A0A6YYH2 397 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 MEIS3P1A6NDR6 274 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 A6NJ64 397 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 SSX5O60225 188 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 TUSC2O75896 110 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 CRYZL1O95825 349 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 RRASP10301 218 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 PTHLHP12272 177 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 PSMB8P28062 276 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 CD40LGP29965 261 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 HOXD3P31249 432 aaPredicted RBP6.4□□□□□ -1.38
SNX1-207ENST00000559401 RPS19P39019 145 aaKnown RBP6.4□□□□□ -1.38
SNX1-207ENST00000559401 TAGLNQ01995 201 aaKnown RBP6.4□□□□□ -1.38
SNX1-207ENST00000559401 TMEM267Q0VDI3 215 aaPredicted RBP6.4□□□□□ -1.38
SNX1-207ENST00000559401 ACTBL2Q562R1 376 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 UBE2NLQ5JXB2 153 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 CNIH2Q6PI25 160 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 KCTD9Q7L273 389 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 ZNF645Q8N7E2 425 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 TCTEX1D1Q8N7M0 179 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 SAMD12Q8N8I0 201 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 LFNGQ8NES3 379 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 OR5M8Q8NGP6 311 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 CASTOR1Q8WTX7 329 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 C4orf3Q8WVX3 66 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 ARPC1AQ92747 370 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 S100A16Q96FQ6 103 aaKnown RBP6.4□□□□□ -1.38
SNX1-207ENST00000559401 C5orf30Q96GV9 206 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 ADTRPQ96IZ2 230 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 P2RX4Q99571 388 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 MCRIP2Q9BUT9 160 aaKnown RBP6.4□□□□□ -1.38
SNX1-207ENST00000559401 FUNDC2Q9BWH2 189 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 KLK15Q9H2R5 256 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 AUNIPQ9H7T9 357 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 IFT46Q9NQC8 304 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 ZNF355PQ9NSJ1 428 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 AURKAIP1Q9NWT8 199 aaPredicted RBP6.4□□□□□ -1.38
SNX1-207ENST00000559401 FOXA2Q9Y261 457 aaPredicted RBP6.4□□□□□ -1.38
SNX1-207ENST00000559401 VSIG4Q9Y279 399 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 OR2W1Q9Y3N9 320 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 NOTCH3Q9UM47 2321 aa6.4□□□□□ -1.38
SNX1-207ENST00000559401 LINC00473A8K010 186 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 FCGR3BO75015 233 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 TMEM127O75204 238 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 IGLV1-40P01703 118 aa6.39□□□□□ -1.39
SNX1-207ENST00000559401 PPIFP30405 207 aaKnown RBP6.39□□□□□ -1.39
SNX1-207ENST00000559401 DUTP33316 252 aaKnown RBP6.39□□□□□ -1.39
SNX1-207ENST00000559401 CBX5P45973 191 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms