RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 TOLLIPQ9H0E2 274 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 AURKAIP1Q9NWT8 199 aaPredicted RBP11.97□□□□□ -0.49
RPL28-207ENST00000558815 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 ETV7Q9Y603 341 aa11.97□□□□□ -0.49
RPL28-207ENST00000558815 A0A1W2PN81 502 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 CCL24O00175 119 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 SLC25A17O43808 307 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 SSX5O60225 188 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 CA2P00918 260 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 FCER2P06734 321 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 NFYAP23511 347 aaPredicted RBP11.96□□□□□ -0.49
RPL28-207ENST00000558815 PSMB8P28062 276 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 SLC6A1P30531 599 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 HOXD3P31249 432 aaPredicted RBP11.96□□□□□ -0.49
RPL28-207ENST00000558815 CHRNA7P36544 502 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 CDX1P47902 265 aaPredicted RBP11.96□□□□□ -0.49
RPL28-207ENST00000558815 CX3CL1P78423 397 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 PITPNAQ00169 270 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 SRSF7Q16629 238 aaKnown RBP eCLIP11.96□□□□□ -0.49
RPL28-207ENST00000558815 Q6ZS49 121 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 H1FOOQ8IZA3 346 aaPredicted RBP11.96□□□□□ -0.49
RPL28-207ENST00000558815 BVESQ8NE79 360 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 MRAPQ8TCY5 172 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 CASTOR1Q8WTX7 329 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 FLYWCH2Q96CP2 140 aaKnown RBP11.96□□□□□ -0.49
RPL28-207ENST00000558815 YIPF6Q96EC8 236 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 KLK15Q9H2R5 256 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 TPSG1Q9NRR2 321 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 GAB2Q9UQC2 676 aa11.96□□□□□ -0.49
RPL28-207ENST00000558815 DIRAS3O95661 229 aa11.95□□□□□ -0.5
RPL28-207ENST00000558815 PPIFP30405 207 aaKnown RBP11.95□□□□□ -0.5
RPL28-207ENST00000558815 CBX3Q13185 183 aa11.95□□□□□ -0.5
RPL28-207ENST00000558815 ZNF660Q6AZW8 331 aaPredicted RBP11.95□□□□□ -0.5
RPL28-207ENST00000558815 RNF152Q8N8N0 203 aa11.95□□□□□ -0.5
RPL28-207ENST00000558815 HARBI1Q96MB7 349 aa11.95□□□□□ -0.5
RPL28-207ENST00000558815 P2RX4Q99571 388 aa11.95□□□□□ -0.5
RPL28-207ENST00000558815 RNF5Q99942 180 aa11.95□□□□□ -0.5
RPL28-207ENST00000558815 ZNF580Q9UK33 172 aa11.95□□□□□ -0.5
RPL28-207ENST00000558815 PRKDCP78527 4128 aaKnown RBP11.95□□□□□ -0.5
RPL28-207ENST00000558815 SHOXO15266 292 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 SPDEFO95238 335 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 DUS4LO95620 317 aaKnown RBP11.94□□□□□ -0.5
RPL28-207ENST00000558815 PTHLHP12272 177 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 SCAND1P57086 179 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 GNB1P62873 340 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 RTL8BQ17RB0 113 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 UNQ5815/PRO19632Q6UWF5 114 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 REC114Q7Z4M0 266 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 PPP1R27Q86WC6 154 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 GRPEL2Q8TAA5 225 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 DPF1Q92782 380 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 DCSTAMPQ9H295 470 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 GNB4Q9HAV0 340 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 DIABLOQ9NR28 239 aa11.94□□□□□ -0.5
RPL28-207ENST00000558815 FOXA2Q9Y261 457 aaPredicted RBP11.94□□□□□ -0.5
RPL28-207ENST00000558815 CTXN2P0C2S0 81 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 RPS19P39019 145 aaKnown RBP11.93□□□□□ -0.5
RPL28-207ENST00000558815 LUMP51884 338 aaPredicted RBP11.93□□□□□ -0.5
RPL28-207ENST00000558815 ARPC4P59998 168 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 CNIH2Q6PI25 160 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 GVQW1Q8N7I0 195 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 C4orf3Q8WVX3 66 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 ARPC1AQ92747 370 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 ANXA10Q9UJ72 324 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 SPATA2Q9UM82 520 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 OR2W1Q9Y3N9 320 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 NOTCH3Q9UM47 2321 aa11.93□□□□□ -0.5
RPL28-207ENST00000558815 MEIS3P1A6NDR6 274 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 SOX15O60248 233 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 TUSC2O75896 110 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 CNIH1O95406 144 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 CRYZL1O95825 349 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 IGLV1-40P01703 118 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 EGR2P11161 476 aaPredicted RBP11.92□□□□□ -0.5
RPL28-207ENST00000558815 DUTP33316 252 aaKnown RBP11.92□□□□□ -0.5
RPL28-207ENST00000558815 RAB9AP51151 201 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 TMEM267Q0VDI3 215 aaPredicted RBP11.92□□□□□ -0.5
RPL28-207ENST00000558815 FXYD3Q14802 87 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 ACTBL2Q562R1 376 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 OR2B11Q5JQS5 317 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 CROCCP3Q8IVE0 287 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 LFNGQ8NES3 379 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 BEST4Q8NFU0 473 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 OR11H1Q8NG94 326 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 MCRIP2Q9BUT9 160 aaKnown RBP11.92□□□□□ -0.5
RPL28-207ENST00000558815 GPR61Q9BZJ8 451 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 VSIG4Q9Y279 399 aa11.92□□□□□ -0.5
RPL28-207ENST00000558815 IGKV1D-13A0A0B4J2D9 117 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 LINC00473A8K010 186 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 IGLV2-23P01705 113 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 IGKV1-13P0DP09 117 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 RRASP10301 218 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 KRTAP10-11P60412 298 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 NCS1P62166 190 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 TAGLNQ01995 201 aaKnown RBP11.91□□□□□ -0.5
RPL28-207ENST00000558815 PJVKQ0ZLH3 352 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 ZNF562Q6V9R5 426 aa11.91□□□□□ -0.5
RPL28-207ENST00000558815 ZNF645Q8N7E2 425 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms