RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 C15orf40Q8WUR7 153 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 DGCR14Q96DF8 476 aaKnown RBP9.9□□□□□ -0.82
LRRC28-206ENST00000558471 CITED1Q99966 193 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 RASL11BQ9BPW5 248 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 WNT10AQ9GZT5 417 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 CCL28Q9NRJ3 127 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 LIN7CQ9NUP9 197 aaKnown RBP9.9□□□□□ -0.82
LRRC28-206ENST00000558471 NDUFA13Q9P0J0 144 aa9.9□□□□□ -0.82
LRRC28-206ENST00000558471 RBMX2Q9Y388 322 aaKnown RBP9.9□□□□□ -0.82
LRRC28-206ENST00000558471 LINC00473A8K010 186 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 NBR2O15453 112 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 PEX14O75381 377 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 RBBP9O75884 186 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 SLC22A5O76082 557 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 IGHG2P01859 326 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 APOA2P02652 100 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 IGKV1-16P04430 117 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 THBS3P49746 956 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 FXYD4P59646 89 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 DGCR2P98153 550 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 IL18Q14116 193 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 FOXB2Q5VYV0 432 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 PYHIN1Q6K0P9 492 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 PDPNQ86YL7 162 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 BVESQ8NE79 360 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 WIPF2Q8TF74 440 aaPredicted RBP9.89□□□□□ -0.83
LRRC28-206ENST00000558471 SECTM1Q8WVN6 248 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 FCAMRQ8WWV6 532 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 DDB2Q92466 427 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 RNF5Q99942 180 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 SOSTQ9BQB4 213 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 MMP27Q9H306 513 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 SLC35D1Q9NTN3 355 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 MTFP1Q9UDX5 166 aa9.89□□□□□ -0.83
LRRC28-206ENST00000558471 GABARAPH6UMI1 98 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 NDUFA3O95167 84 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 RPS16P62249 146 aaKnown RBP9.88□□□□□ -0.83
LRRC28-206ENST00000558471 RPL30P62888 115 aaKnown RBP9.88□□□□□ -0.83
LRRC28-206ENST00000558471 EIF4EBP1Q13541 118 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-206ENST00000558471 HIST2H2BDQ6DRA6 164 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 SLC35E3Q7Z769 313 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 C11orf44Q8N8P7 122 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 OR6F1Q8NGZ6 308 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 FLYWCH2Q96CP2 140 aaKnown RBP9.88□□□□□ -0.83
LRRC28-206ENST00000558471 ADTRPQ96IZ2 230 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 GPHA2Q96T91 129 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 HSPB9Q9BQS6 159 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 ZNF2Q9BSG1 426 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-206ENST00000558471 SLC5A7Q9GZV3 580 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 RABL2AQ9UBK7 228 aaPredicted RBP9.88□□□□□ -0.83
LRRC28-206ENST00000558471 RABL2BQ9UNT1 228 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 A3GALT2U3KPV4 340 aa9.88□□□□□ -0.83
LRRC28-206ENST00000558471 TET2Q6N021 2002 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-206ENST00000558471 FABP12A6NFH5 140 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 M0QYG6 137 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 CTDSPLO15194 276 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 HERV-K104P61576 105 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 TSPAN5P62079 268 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 MRPS10P82664 201 aaKnown RBP9.87□□□□□ -0.83
LRRC28-206ENST00000558471 TAGLNQ01995 201 aaKnown RBP9.87□□□□□ -0.83
LRRC28-206ENST00000558471 PSG5Q15238 335 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 MSMO1Q15800 293 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 C5orf64Q2M2E5 130 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 LIN54Q6MZP7 749 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 CENPVQ7Z7K6 275 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-206ENST00000558471 TMEM17Q86X19 198 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 MFSD4AQ8N468 514 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 MOB3AQ96BX8 217 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 NOL4LQ96MY1 436 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-206ENST00000558471 TINAGL1Q9GZM7 467 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-206ENST00000558471 FBXL15Q9H469 300 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 TAS2R8Q9NYW2 309 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 KIAA1456Q9P272 454 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 ZNF107Q9UII5 783 aaPredicted RBP9.87□□□□□ -0.83
LRRC28-206ENST00000558471 LINC00527Q9UJ94 153 aa9.87□□□□□ -0.83
LRRC28-206ENST00000558471 SRRM4A7MD48 611 aaKnown RBP9.86□□□□□ -0.83
LRRC28-206ENST00000558471 FCN1O00602 326 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 RRHO14718 337 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 TNFSF12O43508 249 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 FCGR3BO75015 233 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 CD3DP04234 171 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 RRASP10301 218 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 CD28P10747 220 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 GNRHRP30968 328 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 S100A5P33763 92 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 ANK2Q01484 3957 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 RTL8BQ17RB0 113 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 TMEM177Q53S58 311 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 VAX1Q5SQQ9 334 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 ZNF66Q6ZN08 573 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 ZNF818PQ6ZRF7 136 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 KCTD9Q7L273 389 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 TMEM229BQ8NBD8 167 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 ZBTB34Q8NCN2 500 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 OR5AU1Q8NGC0 362 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 SMIM4Q8WVI0 70 aa9.86□□□□□ -0.83
LRRC28-206ENST00000558471 TSNAXQ99598 290 aaKnown RBP9.86□□□□□ -0.83
LRRC28-206ENST00000558471 HSD17B10Q99714 261 aaKnown RBP9.86□□□□□ -0.83
LRRC28-206ENST00000558471 IGHV7-81A0A0B4J1V7 117 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms