RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 RCVRNP35243 200 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 RFX2P48378 723 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 RPS16P62249 146 aaKnown RBP9.78□□□□□ -0.84
SMAD3-205ENST00000558428 CBX3Q13185 183 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 HIST2H2BDQ6DRA6 164 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 CENPVQ7Z7K6 275 aaPredicted RBP9.78□□□□□ -0.84
SMAD3-205ENST00000558428 FOXRED2Q8IWF2 684 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 NPBQ8NG41 125 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 WIPF2Q8TF74 440 aaPredicted RBP9.78□□□□□ -0.84
SMAD3-205ENST00000558428 SECTM1Q8WVN6 248 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 ADTRPQ96IZ2 230 aa9.78□□□□□ -0.84
SMAD3-205ENST00000558428 RBMX2Q9Y388 322 aaKnown RBP9.78□□□□□ -0.84
SMAD3-205ENST00000558428 LINC01548A6NM66 108 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 RRHO14718 337 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 KCNAB3O43448 404 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 TPPPO94811 219 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 CD28P10747 220 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 HLA-DMAP28067 261 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 DUTP33316 252 aaKnown RBP9.77□□□□□ -0.85
SMAD3-205ENST00000558428 HRH1P35367 487 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 FXYD4P59646 89 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 HERV-K104P61576 105 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 TAGLNQ01995 201 aaKnown RBP9.77□□□□□ -0.85
SMAD3-205ENST00000558428 PLGLAQ15195 96 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 RTL8BQ17RB0 113 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 C5orf64Q2M2E5 130 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 OVCH2Q7RTZ1 564 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 BVESQ8NE79 360 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 OR5AU1Q8NGC0 362 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 MCFD2Q8NI22 146 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 C15orf40Q8WUR7 153 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 GIMAP1Q8WWP7 306 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 FLYWCH2Q96CP2 140 aaKnown RBP9.77□□□□□ -0.85
SMAD3-205ENST00000558428 DIRAS2Q96HU8 199 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 NOL4LQ96MY1 436 aaPredicted RBP9.77□□□□□ -0.85
SMAD3-205ENST00000558428 ABHD1Q96SE0 405 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 RNF5Q99942 180 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 HSPB9Q9BQS6 159 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 DCUN1D5Q9BTE7 237 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 FBXL15Q9H469 300 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 ZNF107Q9UII5 783 aaPredicted RBP9.77□□□□□ -0.85
SMAD3-205ENST00000558428 LINC00527Q9UJ94 153 aa9.77□□□□□ -0.85
SMAD3-205ENST00000558428 PSMB11A5LHX3 300 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 LINC00473A8K010 186 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 M0QZ24 198 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 ZNF701M0R085 212 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-205ENST00000558428 AP4M1O00189 453 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 IGLV2-14P01704 120 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 HLA-DRB1P01911 266 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 RRASP10301 218 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 DYRK1AQ13627 763 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 IL18Q14116 193 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 LIN54Q6MZP7 749 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 C10orf99Q6UWK7 81 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 KCTD9Q7L273 389 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 TMEM17Q86X19 198 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 LYSMD2Q8IV50 215 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 OR52I2Q8NH67 350 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 CHPT1Q8WUD6 406 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 DDB2Q92466 427 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 HARBI1Q96MB7 349 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 TSNAXQ99598 290 aaKnown RBP9.76□□□□□ -0.85
SMAD3-205ENST00000558428 ZNF2Q9BSG1 426 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-205ENST00000558428 SLC5A7Q9GZV3 580 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 NXF2Q9GZY0 626 aaKnown RBP9.76□□□□□ -0.85
SMAD3-205ENST00000558428 CCL28Q9NRJ3 127 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 KLK11Q9UBX7 282 aa9.76□□□□□ -0.85
SMAD3-205ENST00000558428 SHOXO15266 292 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 SPDEFO95238 335 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 CRYZL1O95825 349 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 TSPAN5P62079 268 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 PSG5Q15238 335 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 ZNF660Q6AZW8 331 aaPredicted RBP9.75□□□□□ -0.85
SMAD3-205ENST00000558428 PYHIN1Q6K0P9 492 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 DHRS11Q6UWP2 260 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 ZNF329Q86UD4 541 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 STPG2Q8N412 459 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 OR4X2Q8NGF9 303 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 TCTEX1D2Q8WW35 142 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 FCAMRQ8WWV6 532 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 HSD17B10Q99714 261 aaKnown RBP9.75□□□□□ -0.85
SMAD3-205ENST00000558428 CITED2Q99967 270 aaPredicted RBP9.75□□□□□ -0.85
SMAD3-205ENST00000558428 TAS2R8Q9NYW2 309 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 METTL1Q9UBP6 276 aaKnown RBP9.75□□□□□ -0.85
SMAD3-205ENST00000558428 PRELID3BQ9Y3B1 194 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 TNCP24821 2201 aa9.75□□□□□ -0.85
SMAD3-205ENST00000558428 IGHV7-81A0A0B4J1V7 117 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 GABARAPH6UMI1 98 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 TNFSF12O43508 249 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 SLC25A17O43808 307 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 FCGR3BO75015 233 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 LGALS7P47929 136 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 RPL30P62888 115 aaKnown RBP9.74□□□□□ -0.85
SMAD3-205ENST00000558428 SLC35B1P78383 322 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 MRPS10P82664 201 aaKnown RBP9.74□□□□□ -0.85
SMAD3-205ENST00000558428 DGCR2P98153 550 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 MSMO1Q15800 293 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 C2orf68Q2NKX9 166 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 NSUN5P1Q3KNT7 163 aa9.74□□□□□ -0.85
SMAD3-205ENST00000558428 TMEM177Q53S58 311 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms