RNA–Protein interactions for RNA: ENST00000558385.1

LINC00593-201, long intergenic non-protein coding RNA 593, humanhuman

TSL 3

Gene LINC00593, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00593-201ENST00000558385 PARP11Q9NR21 331 aa10.06□□□□□ -0.8
LINC00593-201ENST00000558385 LYRM2Q9NU23 88 aaPredicted RBP10.06□□□□□ -0.8
LINC00593-201ENST00000558385 FBXL17Q9UF56 701 aa10.06□□□□□ -0.8
LINC00593-201ENST00000558385 MIOXQ9UGB7 285 aa10.06□□□□□ -0.8
LINC00593-201ENST00000558385 GAB2Q9UQC2 676 aa10.06□□□□□ -0.8
LINC00593-201ENST00000558385 RCL1Q9Y2P8 373 aaKnown RBP10.06□□□□□ -0.8
LINC00593-201ENST00000558385 PRRC2AP48634 2157 aaKnown RBP10.06□□□□□ -0.8
LINC00593-201ENST00000558385 IGHV3OR15-7A0A075B7D8 119 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 C12orf77C9JDV5 145 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 SIGLEC5O15389 551 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 SPINT2O43291 252 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 ADAM20O43506 726 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 ZNF737O75373 536 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 SCGB1D2O95969 90 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 ARHGDIBP52566 201 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 VAMP2P63027 116 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 COL10A1Q03692 680 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 CLEC12BQ2HXU8 276 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 TUSC1Q2TAM9 212 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 TMEM30BQ3MIR4 351 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 FAM74A1Q5RGS3 127 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 ZNF66Q6ZN08 573 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 FOXRED2Q8IWF2 684 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 SPAG16Q8N0X2 631 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 CD177Q8N6Q3 437 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 ZNF645Q8N7E2 425 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 IL1F10Q8WWZ1 152 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 OR1A1Q9P1Q5 309 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 OR14J1Q9UGF5 321 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 CACFD1Q9UGQ2 172 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 STRAPQ9Y3F4 350 aaKnown RBP10.05□□□□□ -0.8
LINC00593-201ENST00000558385 RBM7Q9Y580 266 aaKnown RBP10.05□□□□□ -0.8
LINC00593-201ENST00000558385 MALRD1Q5VYJ5 2156 aa10.05□□□□□ -0.8
LINC00593-201ENST00000558385 ZNF705EA8MWA4 302 aaPredicted RBP10.04□□□□□ -0.8
LINC00593-201ENST00000558385 TRIM77I1YAP6 450 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 K7N7A8 449 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 GPR37O15354 613 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 LY86O95711 162 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 HBZP02008 142 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 GYPAP02724 150 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 SPP1P10451 314 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 GABRA2P47869 451 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 RPL23AP62750 156 aaKnown RBP10.04□□□□□ -0.8
LINC00593-201ENST00000558385 HOXA4Q00056 320 aaPredicted RBP10.04□□□□□ -0.8
LINC00593-201ENST00000558385 PJVKQ0ZLH3 352 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 CATR1Q13166 79 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 EIF4EBP1Q13541 118 aaPredicted RBP10.04□□□□□ -0.8
LINC00593-201ENST00000558385 KRBOX4Q5JUW0 171 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 DRAM1Q8N682 238 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 TMEM252Q8N6L7 170 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 OR1S2Q8NGQ3 325 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 CD300LFQ8TDQ1 290 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 EDARADDQ8WWZ3 215 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 GPR146Q96CH1 333 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 COQ2Q96H96 371 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 LINC00052Q96N35 136 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 BPESC1Q9GZL8 116 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 PATZ1Q9HBE1 687 aaKnown RBP10.04□□□□□ -0.8
LINC00593-201ENST00000558385 OR2S2Q9NQN1 319 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 WSB1Q9Y6I7 421 aa10.04□□□□□ -0.8
LINC00593-201ENST00000558385 MED13LQ71F56 2210 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 IGHV4-30-2A0A087WSY4 118 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 NKX6-3A6NJ46 265 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 KIAA1324LA8MWY0 1029 aaPredicted RBP10.03□□□□□ -0.8
LINC00593-201ENST00000558385 UMAD1C9J7I0 102 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 WRBO00258 174 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 YPEL1O60688 119 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 MED6O75586 246 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 OR8U9P0C7N5 309 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 F2RL1P55085 397 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 EWSR1Q01844 656 aaKnown RBP eCLIP10.03□□□□□ -0.8
LINC00593-201ENST00000558385 AESQ08117 197 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 AVPI1Q5T686 147 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 C5orf24Q7Z6I8 188 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 KRTAP1-3Q8IUG1 177 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 OR8U1Q8NH10 309 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 GNPNAT1Q96EK6 184 aaPredicted RBP10.03□□□□□ -0.8
LINC00593-201ENST00000558385 NEIL1Q96FI4 390 aaPredicted RBP10.03□□□□□ -0.8
LINC00593-201ENST00000558385 GAFA1Q96PS6 74 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 CCL13Q99616 98 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 HSD17B10Q99714 261 aaKnown RBP10.03□□□□□ -0.8
LINC00593-201ENST00000558385 HIPK2Q9H2X6 1198 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 OR6C3Q9NZP0 311 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 JPT1Q9UK76 154 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 MMP24Q9Y5R2 645 aa10.03□□□□□ -0.8
LINC00593-201ENST00000558385 TMEM218A2RU14 115 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 C15orf65H3BRN8 121 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 TOR1AO14656 332 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 TMPRSS2O15393 492 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 CHST1O43916 411 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 DFFBO76075 338 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 SCAF4O95104 1147 aaKnown RBP10.02□□□□□ -0.81
LINC00593-201ENST00000558385 CAV2P51636 162 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 LMO4P61968 165 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 POLR2GP62487 172 aaKnown RBP eCLIP10.02□□□□□ -0.81
LINC00593-201ENST00000558385 MIDNQ504T8 468 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 ZNF585BQ52M93 769 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 LRRC10Q5BKY1 277 aa10.02□□□□□ -0.81
LINC00593-201ENST00000558385 CXorf66Q5JRM2 361 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms