RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 HPRT1P00492 218 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 KNG1P01042 644 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 IGHV3-9P01782 118 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 IL6RP08887 468 aaPredicted RBP6.79□□□□□ -1.32
RTF1-205ENST00000558298 SNRPCP09234 159 aaKnown RBP6.79□□□□□ -1.32
RTF1-205ENST00000558298 PGA5P0DJD9 388 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ZNF728P0DKX0 622 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ESDP10768 282 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 PTNP21246 168 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 CD40P25942 277 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ATP6V0CP27449 155 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 BRS3P32247 399 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 CEBPGP53567 150 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ENDOGQ14249 297 aaKnown RBP6.79□□□□□ -1.32
RTF1-205ENST00000558298 ATP6V1FQ16864 119 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 AARDQ4LEZ3 155 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 PDZD11Q5EBL8 140 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 SPSB3Q6PJ21 355 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 SLC25A47Q6Q0C1 308 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 TEX43Q6ZNM6 134 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 DOK3Q7L591 496 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.79□□□□□ -1.32
RTF1-205ENST00000558298 C5orf24Q7Z6I8 188 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 DTX2Q86UW9 622 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 LRRC75A-AS1Q8N1F1 130 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ZNF611Q8N823 705 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 OR5L1Q8NGL2 311 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 OR2T10Q8NGZ9 312 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 OR5B3Q8NH48 314 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ZNRF4Q8WWF5 429 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 PP6455Q8WZ26 134 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 NABP1Q96AH0 204 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 SLC35E1Q96K37 410 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 C18orf12Q96KH6 178 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 MS4A10Q96PG2 267 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ATP5SQ99766 215 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 NICN1Q9BSH3 213 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 VAMP8Q9BV40 100 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 EMC6Q9BV81 110 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 RBKSQ9H477 322 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 LPAR2Q9HBW0 351 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 G6PC2Q9NQR9 355 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ZNF346Q9UL40 294 aaKnown RBP6.79□□□□□ -1.32
RTF1-205ENST00000558298 URGCP-MRPS24S4R325 110 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ARFGEF3Q5TH69 2177 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 ITPR3Q14573 2671 aa6.79□□□□□ -1.32
RTF1-205ENST00000558298 TRBV9A0A0B4J1U6 114 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 OR6C6A6NF89 314 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 DPRXA6NFQ7 191 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 DHRS7CA6NNS2 312 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ZNF727A8MUV8 499 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 SHISA9B4DS77 424 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 F6UZH7 168 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 HS3ST1O14792 307 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 KBTBD11O94819 623 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 MPIG6BO95866 241 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 SCGB1D2O95969 90 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 PFN1P07737 140 aaKnown RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 CD3EP07766 207 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 DBHP09172 617 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 HNF1AP20823 631 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 CCL1P22362 96 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 PPP1CCP36873 323 aaKnown RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 NKX2-1P43699 371 aaPredicted RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 GALR1P47211 349 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 CLRN1P58418 232 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 UBE2G2P60604 165 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 RAB11AP62491 216 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 LCN6P62502 163 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 HBG1P69891 147 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 HBG2P69892 147 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ARF1P84077 181 aaKnown RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 COL10A1Q03692 680 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 BSPH1Q075Z2 132 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 TMEM187Q14656 261 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 SRSF7Q16629 238 aaKnown RBP eCLIP6.78□□□□□ -1.32
RTF1-205ENST00000558298 BSXQ3C1V8 233 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ZNF672Q499Z4 452 aaPredicted RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 MORN2Q502X0 79 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 TMEM41BQ5BJD5 291 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ARSJQ5FYB0 599 aaPredicted RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 FAM27BQ5VT28 67 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 GFI1BQ5VTD9 330 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 CYB5R2Q6BCY4 276 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ASPHD2Q6ICH7 369 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 GLIPR1L1Q6UWM5 242 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ZNF705AQ6ZN79 300 aaPredicted RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 C1orf174Q8IYL3 243 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 PNKDQ8N490 385 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 NUP37Q8NFH4 326 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 OR51G1Q8NGK1 321 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 SCGB1C1Q8TD33 95 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ERGIC1Q969X5 290 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 ZNF837Q96EG3 531 aaPredicted RBP6.78□□□□□ -1.32
RTF1-205ENST00000558298 PLPPR2Q96GM1 343 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 TSSK2Q96PF2 358 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 HS3ST6Q96QI5 342 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 RAB40CQ96S21 281 aa6.78□□□□□ -1.32
RTF1-205ENST00000558298 FOXC2Q99958 501 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms