RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 SPATA2Q9UM82 520 aa17■□□□□ 0.31
CRNDE-203ENST00000557792 RBM7Q9Y580 266 aaKnown RBP17■□□□□ 0.31
CRNDE-203ENST00000557792 NBEAL2Q6ZNJ1 2754 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 TMEM127O75204 238 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 OR5H8P0DN80 308 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 SLC6A1P30531 599 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 RPS16P62249 146 aaKnown RBP16.99■□□□□ 0.31
CRNDE-203ENST00000557792 CX3CL1P78423 397 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 PLGLAQ15195 96 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 ZNF660Q6AZW8 331 aaPredicted RBP16.99■□□□□ 0.31
CRNDE-203ENST00000557792 PDPNQ86YL7 162 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 MRPL41Q8IXM3 137 aaKnown RBP16.99■□□□□ 0.31
CRNDE-203ENST00000557792 LINC00482Q8N8I6 264 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 FBXO7Q9Y3I1 522 aa16.99■□□□□ 0.31
CRNDE-203ENST00000557792 K7EIL1 84 aa16.98■□□□□ 0.31
CRNDE-203ENST00000557792 APOA2P02652 100 aa16.98■□□□□ 0.31
CRNDE-203ENST00000557792 CTXN2P0C2S0 81 aa16.98■□□□□ 0.31
CRNDE-203ENST00000557792 PSMB8P28062 276 aa16.98■□□□□ 0.31
CRNDE-203ENST00000557792 CDX1P47902 265 aaPredicted RBP16.98■□□□□ 0.31
CRNDE-203ENST00000557792 NDPQ00604 133 aa16.98■□□□□ 0.31
CRNDE-203ENST00000557792 CROCCP3Q8IVE0 287 aa16.98■□□□□ 0.31
CRNDE-203ENST00000557792 FLYWCH2Q96CP2 140 aaKnown RBP16.98■□□□□ 0.31
CRNDE-203ENST00000557792 KLK15Q9H2R5 256 aa16.98■□□□□ 0.31
CRNDE-203ENST00000557792 SLC35D1Q9NTN3 355 aa16.98■□□□□ 0.31
CRNDE-203ENST00000557792 METTL1Q9UBP6 276 aaKnown RBP16.98■□□□□ 0.31
CRNDE-203ENST00000557792 A0A0A6YYH2 397 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 TRAV41A0A0B4J266 112 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 A6NJ64 397 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 J3QRK9 145 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 EGR2P11161 476 aaPredicted RBP16.97■□□□□ 0.31
CRNDE-203ENST00000557792 NFYAP23511 347 aaPredicted RBP16.97■□□□□ 0.31
CRNDE-203ENST00000557792 MYCNOSP40205 109 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 CNIH2Q6PI25 160 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 DUX3Q96PT4 197 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 CLCC1Q96S66 551 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 P2RX4Q99571 388 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 TSNAXQ99598 290 aaKnown RBP16.97■□□□□ 0.31
CRNDE-203ENST00000557792 DIABLOQ9NR28 239 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 ANXA10Q9UJ72 324 aa16.97■□□□□ 0.31
CRNDE-203ENST00000557792 IGLV1-40P01703 118 aa16.96■□□□□ 0.31
CRNDE-203ENST00000557792 KIAA0141Q14154 515 aaPredicted RBP16.96■□□□□ 0.31
CRNDE-203ENST00000557792 MINDY2Q8NBR6 621 aa16.96■□□□□ 0.31
CRNDE-203ENST00000557792 RCC1LQ96I51 464 aaKnown RBP16.96■□□□□ 0.31
CRNDE-203ENST00000557792 RAX2Q96IS3 184 aa16.96■□□□□ 0.31
CRNDE-203ENST00000557792 FUNDC2Q9BWH2 189 aa16.96■□□□□ 0.31
CRNDE-203ENST00000557792 AUNIPQ9H7T9 357 aa16.96■□□□□ 0.31
CRNDE-203ENST00000557792 NUBP2Q9Y5Y2 271 aa16.96■□□□□ 0.31
CRNDE-203ENST00000557792 CCL24O00175 119 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 PTHLHP12272 177 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 CRIP2P52943 208 aaPredicted RBP16.95■□□□□ 0.3
CRNDE-203ENST00000557792 C19orf54Q5BKX5 351 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 ZNF562Q6V9R5 426 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 GVQW1Q8N7I0 195 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 BVESQ8NE79 360 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 MYOZ3Q8TDC0 251 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 TPSG1Q9NRR2 321 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 OR2W1Q9Y3N9 320 aa16.95■□□□□ 0.3
CRNDE-203ENST00000557792 SLC25A17O43808 307 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 SPDEFO95238 335 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 IGLV2-23P01705 113 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 HLA-DQB1P01920 261 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 DUTP33316 252 aaKnown RBP16.94■□□□□ 0.3
CRNDE-203ENST00000557792 LGALS7P47929 136 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 KRTAP10-11P60412 298 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 DEFB136Q30KP8 78 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 VAX1Q5SQQ9 334 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 TMEM65Q6PI78 240 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 OR13F1Q8NGS4 319 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 DDB2Q92466 427 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 A3GALT2U3KPV4 340 aa16.94■□□□□ 0.3
CRNDE-203ENST00000557792 KMT2CQ8NEZ4 4911 aaKnown RBP16.93■□□□□ 0.3
CRNDE-203ENST00000557792 IGKV1D-13A0A0B4J2D9 117 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 WI2-2373I1.2A0A1W2PRP0 233 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 SRRM4A7MD48 611 aaKnown RBP16.93■□□□□ 0.3
CRNDE-203ENST00000557792 LINC00473A8K010 186 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 SOX15O60248 233 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 DUS4LO95620 317 aaKnown RBP16.93■□□□□ 0.3
CRNDE-203ENST00000557792 CA2P00918 260 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 SMIM18P0DKX4 95 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 IGKV1-13P0DP09 117 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 LUMP51884 338 aaPredicted RBP16.93■□□□□ 0.3
CRNDE-203ENST00000557792 NCS1P62166 190 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 TAGLNQ01995 201 aaKnown RBP16.93■□□□□ 0.3
CRNDE-203ENST00000557792 ECSCRQ19T08 205 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 HOGA1Q86XE5 327 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 BEST4Q8NFU0 473 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 SLC25A46Q96AG3 418 aa16.93■□□□□ 0.3
CRNDE-203ENST00000557792 S100A16Q96FQ6 103 aaKnown RBP16.93■□□□□ 0.3
CRNDE-203ENST00000557792 FAM103A1Q9BTL3 118 aaKnown RBP16.93■□□□□ 0.3
CRNDE-203ENST00000557792 XRCC3O43542 346 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 CRYGBP07316 175 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 RAB9AP51151 201 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 VBP1P61758 197 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 TMEM177Q53S58 311 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 PPP1R27Q86WC6 154 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 ZNF645Q8N7E2 425 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 SAMD12Q8N8I0 201 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 ZNF491Q8N8L2 437 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 ABHD5Q8WTS1 349 aa16.92■□□□□ 0.3
CRNDE-203ENST00000557792 ADTRPQ96IZ2 230 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms