RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 CT45A6P0DMU7 189 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 CT45A5P0DMU8 189 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 CT45A7P0DMV0 189 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 CBX5P45973 191 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 ARPC4P59998 168 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 RPS16P62249 146 aaKnown RBP10.92□□□□□ -0.66
VPS33B-206ENST00000557358 RTL8BQ17RB0 113 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 OR5AN1Q8NGI8 311 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 NUDCD2Q8WVJ2 157 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 FLYWCH2Q96CP2 140 aaKnown RBP10.92□□□□□ -0.66
VPS33B-206ENST00000557358 NOL4LQ96MY1 436 aaPredicted RBP10.92□□□□□ -0.66
VPS33B-206ENST00000557358 PLSCR3Q9NRY6 295 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 LINC00527Q9UJ94 153 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 GAB2Q9UQC2 676 aa10.92□□□□□ -0.66
VPS33B-206ENST00000557358 IGKV1-6A0A0C4DH72 117 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 H0YJW9 148 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 HLA-DRB1P01911 266 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 RRASP10301 218 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 CD33P20138 364 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 THBS3P49746 956 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 LUMP51884 338 aaPredicted RBP10.91□□□□□ -0.66
VPS33B-206ENST00000557358 C5orf64Q2M2E5 130 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 ZNF260Q3ZCT1 412 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 TMEM69Q5SWH9 247 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 TMEM65Q6PI78 240 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 GLDNQ6ZMI3 551 aaPredicted RBP10.91□□□□□ -0.66
VPS33B-206ENST00000557358 CCDC190Q86UF4 302 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 NPBQ8NG41 125 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 ABHD5Q8WTS1 349 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 PARP12Q9H0J9 701 aaKnown RBP10.91□□□□□ -0.66
VPS33B-206ENST00000557358 SLC35D1Q9NTN3 355 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 PKD1L1Q8TDX9 2849 aa10.91□□□□□ -0.66
VPS33B-206ENST00000557358 RRHO14718 337 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 XRCC3O43542 346 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 SPDEFO95238 335 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 ELANEP08246 267 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 CD40LGP29965 261 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 ETV6P41212 452 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 TAS2R20P59543 309 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 TMEM267Q0VDI3 215 aaPredicted RBP10.9□□□□□ -0.66
VPS33B-206ENST00000557358 IL18Q14116 193 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 SPANXN2Q5MJ10 180 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 ZNF660Q6AZW8 331 aaPredicted RBP10.9□□□□□ -0.66
VPS33B-206ENST00000557358 DRAXINQ8NBI3 349 aaPredicted RBP10.9□□□□□ -0.66
VPS33B-206ENST00000557358 S100ZQ8WXG8 99 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 TSC22D3Q99576 134 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 OR51J1Q9H342 316 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 IFT46Q9NQC8 304 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 PARP11Q9NR21 331 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 RABL2AQ9UBK7 228 aaPredicted RBP10.9□□□□□ -0.66
VPS33B-206ENST00000557358 ANXA10Q9UJ72 324 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 ZNF580Q9UK33 172 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 RABL2BQ9UNT1 228 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 V9GYH0 126 aa10.9□□□□□ -0.66
VPS33B-206ENST00000557358 FABP12A6NFH5 140 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 PLXNB1O43157 2135 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 NDUFA3O95167 84 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 IGF1P05019 195 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 LGALS7P47929 136 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 RPL23AP62750 156 aaKnown RBP10.89□□□□□ -0.67
VPS33B-206ENST00000557358 DEFA6Q01524 100 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 FOXE3Q13461 319 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 HIST2H2BDQ6DRA6 164 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 H1FOOQ8IZA3 346 aaPredicted RBP10.89□□□□□ -0.67
VPS33B-206ENST00000557358 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 BEST4Q8NFU0 473 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 AKIP1Q9NQ31 210 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 SDHAF2Q9NX18 166 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 METTL1Q9UBP6 276 aaKnown RBP10.89□□□□□ -0.67
VPS33B-206ENST00000557358 PRELID3BQ9Y3B1 194 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 OR2W1Q9Y3N9 320 aa10.89□□□□□ -0.67
VPS33B-206ENST00000557358 SHOXO15266 292 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 TPPPO94811 219 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 PTBP1P26599 531 aaKnown RBP eCLIP10.88□□□□□ -0.67
VPS33B-206ENST00000557358 ZNF45Q02386 682 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 TCTEX1D4Q5JR98 221 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 PYHIN1Q6K0P9 492 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 ZNF695Q8IW36 515 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 MFSD4AQ8N468 514 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 ZNF645Q8N7E2 425 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 TCTEX1D1Q8N7M0 179 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 C15orf40Q8WUR7 153 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 HSPB9Q9BQS6 159 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 FBXL15Q9H469 300 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 AUNIPQ9H7T9 357 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 NECAP2Q9NVZ3 263 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 ELF5Q9UKW6 265 aaPredicted RBP10.88□□□□□ -0.67
VPS33B-206ENST00000557358 NOTCH3Q9UM47 2321 aa10.88□□□□□ -0.67
VPS33B-206ENST00000557358 MRPS7Q9Y2R9 242 aaKnown RBP10.88□□□□□ -0.67
VPS33B-206ENST00000557358 TRAV41A0A0B4J266 112 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 LINC01548A6NM66 108 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 ADARB2-AS1A8MUL3 147 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 CREBL2O60519 120 aaPredicted RBP10.87□□□□□ -0.67
VPS33B-206ENST00000557358 CNIH1O95406 144 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 DUS4LO95620 317 aaKnown RBP10.87□□□□□ -0.67
VPS33B-206ENST00000557358 CNTFRP26992 372 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 ZNF846Q147U1 533 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 VMA21Q3ZAQ7 101 aa10.87□□□□□ -0.67
VPS33B-206ENST00000557358 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms