RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 BIRC6Q9NR09 4857 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 RBMXL2O75526 392 aaKnown RBP11.26□□□□□ -0.61
CHD8-211ENST00000556833 VEGFCP49767 419 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 DYRK1AQ13627 763 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
CHD8-211ENST00000556833 IL34Q6ZMJ4 242 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 PDPNQ86YL7 162 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 ARHGAP5-AS1Q96IT6 56 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 PHB2Q99623 299 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 GFI1Q99684 422 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 OR2D2Q9H210 308 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 Q9N2K0 584 aa11.26□□□□□ -0.61
CHD8-211ENST00000556833 BET1O15155 118 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 SPDEFO95238 335 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 BPNT1O95861 308 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 IGLV2-23P01705 113 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 PRH1P02810 166 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 CD1AP06126 327 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 SRMP19623 302 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 PLA2G7Q13093 441 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 IDO2Q6ZQW0 420 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 GTSCR1Q86UQ5 136 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 BVESQ8NE79 360 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 MAFIPQ8WZ33 124 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 THRSPQ92748 146 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 HARBI1Q96MB7 349 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 CMSS1Q9BQ75 279 aaKnown RBP11.25□□□□□ -0.61
CHD8-211ENST00000556833 PECRQ9BY49 303 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 C12orf4Q9NQ89 552 aa11.25□□□□□ -0.61
CHD8-211ENST00000556833 AK6Q9Y3D8 172 aaKnown RBP11.25□□□□□ -0.61
CHD8-211ENST00000556833 HYDINQ4G0P3 5121 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 PTGES3LE9PB15 166 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 CSN3P07498 182 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 TAGLNQ01995 201 aaKnown RBP11.24□□□□□ -0.61
CHD8-211ENST00000556833 RCN1Q15293 331 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 MED22Q15528 200 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 RPEL1Q2QD12 228 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 LIPKQ5VXJ0 399 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 OR6M1Q8NGM8 313 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 PHYHIPQ92561 330 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 C5orf30Q96GV9 206 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 RNF5Q99942 180 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 URM1Q9BTM9 101 aaKnown RBP11.24□□□□□ -0.61
CHD8-211ENST00000556833 MND1Q9BWT6 205 aa11.24□□□□□ -0.61
CHD8-211ENST00000556833 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
CHD8-211ENST00000556833 TRBV6-6A0A0A6YYG2 114 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 A0A0G2JLM5 398 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 A8MZ25 164 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 H0Y980 276 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 SHOXO15266 292 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 IFNA6P05013 189 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 EDN2P20800 178 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 LGALS7P47929 136 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 TMEM50BP56557 158 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
CHD8-211ENST00000556833 RAB11BQ15907 218 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 IGSF11Q5DX21 431 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 PLAC9Q5JTB6 97 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 LCN12Q6JVE5 192 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 MS4A15Q8N5U1 240 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 TINAGL1Q9GZM7 467 aaPredicted RBP11.23□□□□□ -0.61
CHD8-211ENST00000556833 RIMS4Q9H426 269 aaPredicted RBP11.23□□□□□ -0.61
CHD8-211ENST00000556833 FKBP14Q9NWM8 211 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 SDHAF2Q9NX18 166 aa11.23□□□□□ -0.61
CHD8-211ENST00000556833 A0A075B6Q4 140 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 MSGN1A6NI15 193 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 SRRM4A7MD48 611 aaKnown RBP11.22□□□□□ -0.61
CHD8-211ENST00000556833 TRDCB7Z8K6 153 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 J3QRK9 145 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 MPPED1O15442 326 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 CDK1P06493 297 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 UCHL1P09936 223 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 HSMCR30P0CW71 290 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 CD81P60033 236 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 TNXAQ16473 311 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 PTX4Q96A99 478 aa11.22□□□□□ -0.61
CHD8-211ENST00000556833 THAP7Q9BT49 309 aaPredicted RBP11.22□□□□□ -0.61
CHD8-211ENST00000556833 LSM2Q9Y333 95 aaKnown RBP11.22□□□□□ -0.61
CHD8-211ENST00000556833 ALMS1Q8TCU4 4167 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 FOXI3A8MTJ6 420 aaPredicted RBP11.21□□□□□ -0.61
CHD8-211ENST00000556833 H3BUA1 57 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 SLC17A2O00624 439 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 CRYGBP07316 175 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 GSTT2P0CG29 244 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 GSTT2BP0CG30 244 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 EXOSC2Q13868 293 aaKnown RBP11.21□□□□□ -0.61
CHD8-211ENST00000556833 SPHARQ15513 63 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 HES5Q5TA89 166 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 ZNF343Q6P1L6 599 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 DEFB125Q8N687 156 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 PACRGLQ8N7B6 248 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 FBLIM1Q8WUP2 373 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 ACOT12Q8WYK0 555 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 PLCXD1Q9NUJ7 323 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 ZNF230Q9UIE0 474 aaPredicted RBP11.21□□□□□ -0.61
CHD8-211ENST00000556833 MGAT4AQ9UM21 535 aa11.21□□□□□ -0.61
CHD8-211ENST00000556833 RBM7Q9Y580 266 aaKnown RBP11.21□□□□□ -0.61
CHD8-211ENST00000556833 CEPT1Q9Y6K0 416 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms