RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 KCNK15Q9H427 330 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 Q9N2K0 584 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 PARP11Q9NR21 331 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 SSR3Q9UNL2 185 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 WASHC3Q9Y3C0 194 aa5.76□□□□□ -1.49
SCFD1-222ENST00000556768 DSCAML1Q8TD84 2053 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 A0A075B6Q4 140 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 A0A0A6YYD4 124 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 BET1O15155 118 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 SCGNO76038 276 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 APOA2P02652 100 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 SCTP09683 121 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 BTF3P20290 206 aaKnown RBP5.75□□□□□ -1.49
SCFD1-222ENST00000556768 VAMP2P63027 116 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF660Q6AZW8 331 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-222ENST00000556768 C22orf42Q6IC83 251 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 CD200R1LQ6Q8B3 271 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 FAM131AQ6UXB0 335 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 ODF3L1Q8IXM7 274 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 LINC00482Q8N8I6 264 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 NPBQ8NG41 125 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 OR5M8Q8NGP6 311 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 OR10R2Q8NGX6 335 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 ABHD5Q8WTS1 349 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 PTX4Q96A99 478 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 ABHD14BQ96IU4 210 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 TSNAXQ99598 290 aaKnown RBP5.75□□□□□ -1.49
SCFD1-222ENST00000556768 HSPB9Q9BQS6 159 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 GINS4Q9BRT9 223 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 HDHD3Q9BSH5 251 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-222ENST00000556768 IFI27L2Q9H2X8 130 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 OR51J1Q9H342 316 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF580Q9UK33 172 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 WSB1Q9Y6I7 421 aa5.75□□□□□ -1.49
SCFD1-222ENST00000556768 TRAV41A0A0B4J266 112 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 TMEM272A0A1B0GTI8 110 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 HMX3A6NHT5 357 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 RRHO14718 337 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 FABP7O15540 132 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 DIRAS3O95661 229 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 TFAP2AP05549 437 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 CT45A6P0DMU7 189 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 CT45A5P0DMU8 189 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 CT45A7P0DMV0 189 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 GYPEP15421 78 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 GNB3P16520 340 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 UCP3P55916 312 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 SSX1Q16384 188 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 RPL39P5Q59GN2 51 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 PYHIN1Q6K0P9 492 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 Q6ZPA2 131 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 C5orf24Q7Z6I8 188 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 TPRA1Q86W33 373 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 TCTEX1D1Q8N7M0 179 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-222ENST00000556768 C4orf3Q8WVX3 66 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 FLYWCH2Q96CP2 140 aaKnown RBP5.74□□□□□ -1.49
SCFD1-222ENST00000556768 UBE2E2Q96LR5 201 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 GFI1Q99684 422 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 AGMATQ9BSE5 352 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 ATG5Q9H1Y0 275 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 HEYLQ9NQ87 328 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-222ENST00000556768 AURKAIP1Q9NWT8 199 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-222ENST00000556768 RDH8Q9NYR8 311 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 OR1A1Q9P1Q5 309 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 VSIG4Q9Y279 399 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 H0YJW9 148 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 RAMP3O60896 148 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 ACTL6BO94805 426 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 CNIH1O95406 144 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 CTXN2P0C2S0 81 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 OR8U9P0C7N5 309 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 HIST1H1DP16402 221 aaKnown RBP5.74□□□□□ -1.49
SCFD1-222ENST00000556768 PSMB8P28062 276 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 FGF9P31371 208 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-222ENST00000556768 RAB9AP51151 201 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 OR10A3P58181 314 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 PITPNAQ00169 270 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 PLAC9Q5JTB6 97 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 UBE2UQ5VVX9 321 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 SPARTQ8N0X7 666 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 DRAXINQ8NBI3 349 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-222ENST00000556768 RITA1Q96K30 269 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 P2RX4Q99571 388 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 STUB1Q9UNE7 303 aa5.74□□□□□ -1.49
SCFD1-222ENST00000556768 IGHV7-81A0A0B4J1V7 117 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 FOXI3A8MTJ6 420 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-222ENST00000556768 M0R1X1 148 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 LDLRAD4O15165 306 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 ATP6V0E1O15342 81 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 NDUFA3O95167 84 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 SPDEFO95238 335 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 FCGR3AP08637 254 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 OR8U8P0C7N1 319 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 CNTFRP26992 372 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 HOXD3P31249 432 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-222ENST00000556768 LGALS7P47929 136 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 CX3CL1P78423 397 aa5.73□□□□□ -1.49
SCFD1-222ENST00000556768 SRSF7Q16629 238 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCFD1-222ENST00000556768 RTL8BQ17RB0 113 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms