RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 MRPL20Q9BYC9 149 aaKnown RBP7.7□□□□□ -1.18
SCFD1-220ENST00000556486 ANKRD60Q9BZ19 345 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 SELENOIQ9C0D9 397 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 CST11Q9H112 138 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 ALX4Q9H161 411 aaPredicted RBP7.7□□□□□ -1.18
SCFD1-220ENST00000556486 KCNIP1Q9NZI2 227 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 RYR1P21817 5038 aa7.7□□□□□ -1.18
SCFD1-220ENST00000556486 TRGV11A0A075B6L2 103 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 ITGB1BP1O14713 200 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 OVOL1O14753 267 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 LDLRAD4O15165 306 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 SOX15O60248 233 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 RGS11O94810 467 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 IGHV4-30-4P0DP06 118 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 CD37P11049 281 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 MYF6P23409 242 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 BLVRBP30043 206 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-220ENST00000556486 CAPGP40121 348 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 GNMTQ14749 295 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 HMGN3Q15651 99 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 ZNF660Q6AZW8 331 aaPredicted RBP7.69□□□□□ -1.18
SCFD1-220ENST00000556486 PYHIN1Q6K0P9 492 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 Q6ZRM9 215 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 ZNF555Q8NEP9 628 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 GALMQ96C23 342 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 FAM110AQ9BQ89 295 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 TOLLIPQ9H0E2 274 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 IFI27L2Q9H2X8 130 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 WSB1Q9Y6I7 421 aa7.69□□□□□ -1.18
SCFD1-220ENST00000556486 SAA2-SAA4A0A096LPE2 208 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 EFCAB10A6NFE3 127 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 OR5H14A6NHG9 310 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 ARPC1BO15143 372 aaKnown RBP7.68□□□□□ -1.18
SCFD1-220ENST00000556486 CRTAPO75718 401 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-220ENST00000556486 NAPSAO96009 420 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 MAS1P04201 325 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 UBBP0CG47 229 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 SAA2P0DJI9 122 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-220ENST00000556486 CNTFRP26992 372 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 MAPK3P27361 379 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-220ENST00000556486 PPP1CCP36873 323 aaKnown RBP7.68□□□□□ -1.18
SCFD1-220ENST00000556486 VEGFCP49767 419 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 NDPQ00604 133 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 TTC23Q5W5X9 447 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 ZNF880Q6PDB4 577 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 OR2AK2Q8NG84 335 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 DLX4Q92988 240 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-220ENST00000556486 RNF5Q99942 180 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 AGMATQ9BSE5 352 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 KRTAP9-9Q9BYP9 154 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 KRTAP9-4Q9BYQ2 154 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 BANF2Q9H503 90 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 C8orf4Q9NR00 106 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 PARP11Q9NR21 331 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 CNOT2Q9NZN8 540 aaKnown RBP7.68□□□□□ -1.18
SCFD1-220ENST00000556486 PIPOXQ9P0Z9 390 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 MGAT4CQ9UBM8 478 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 FOXA2Q9Y261 457 aaPredicted RBP7.68□□□□□ -1.18
SCFD1-220ENST00000556486 ERGIC3Q9Y282 383 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 NUBP2Q9Y5Y2 271 aa7.68□□□□□ -1.18
SCFD1-220ENST00000556486 A8MZ25 164 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 LINC01619G3V211 115 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 RRHO14718 337 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 RAB29O14966 203 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 RBBP9O75884 186 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 LGALS1P09382 135 aaKnown RBP7.67□□□□□ -1.18
SCFD1-220ENST00000556486 OR8U9P0C7N5 309 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 EGR2P11161 476 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-220ENST00000556486 MC5RP33032 325 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 OR3A3P47888 321 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 SUMO2P61956 95 aaKnown RBP7.67□□□□□ -1.18
SCFD1-220ENST00000556486 CX3CL1P78423 397 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 ST3GAL4Q11206 333 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 LRRC36Q1X8D7 754 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 AKIRIN2Q53H80 203 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 C1orf100Q5SVJ3 147 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 PACRGLQ8N7B6 248 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 ZFP41Q8N8Y5 198 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 SETD9Q8NE22 299 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 OR6Q1Q8NGQ2 317 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 PHYHIPQ92561 330 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 ARPC1AQ92747 370 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 CYYR1Q96J86 154 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 SULT4A1Q9BR01 284 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 TM2D1Q9BX74 207 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 FBXO7Q9Y3I1 522 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
SCFD1-220ENST00000556486 TRBV6-6A0A0A6YYG2 114 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 A0A1W2PPK0 400 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 SCAF4O95104 1147 aaKnown RBP7.66□□□□□ -1.18
SCFD1-220ENST00000556486 CT45A6P0DMU7 189 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 CT45A5P0DMU8 189 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 CT45A7P0DMV0 189 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 CELP19835 753 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 WNT4P56705 351 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 LINC00310P59036 64 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 RPS27AP62979 156 aaKnown RBP7.66□□□□□ -1.18
SCFD1-220ENST00000556486 TMEM267Q0VDI3 215 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-220ENST00000556486 TMEM88Q6PEY1 159 aa7.66□□□□□ -1.18
SCFD1-220ENST00000556486 ZNF562Q6V9R5 426 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms