RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 S100A16Q96FQ6 103 aaKnown RBP9.05□□□□□ -0.96
SLIRP-206ENST00000556375 ADTRPQ96IZ2 230 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 PARP11Q9NR21 331 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 OR2W1Q9Y3N9 320 aa9.05□□□□□ -0.96
SLIRP-206ENST00000556375 DNAH3Q8TD57 4116 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 TUSC2O75896 110 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 SLC22A5O76082 557 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 HLA-DQB1P01920 261 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 NFYAP23511 347 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-206ENST00000556375 ALDH3B2P48448 385 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 LUMP51884 338 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-206ENST00000556375 CRIP2P52943 208 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-206ENST00000556375 ARPC4P59998 168 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 DEFA6Q01524 100 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 CBX3Q13185 183 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 PSG5Q15238 335 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 CTF1Q16619 201 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 RTL8BQ17RB0 113 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 TMEM69Q5SWH9 247 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 SAMD5Q5TGI4 173 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 ZNF660Q6AZW8 331 aaPredicted RBP9.04□□□□□ -0.96
SLIRP-206ENST00000556375 ZNF645Q8N7E2 425 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 GVQW1Q8N7I0 195 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 KLHL30-AS1Q8NEE0 82 aa9.04□□□□□ -0.96
SLIRP-206ENST00000556375 FLYWCH2Q96CP2 140 aaKnown RBP9.04□□□□□ -0.96
SLIRP-206ENST00000556375 METTL1Q9UBP6 276 aaKnown RBP9.04□□□□□ -0.96
SLIRP-206ENST00000556375 PRKDCP78527 4128 aaKnown RBP9.03□□□□□ -0.96
SLIRP-206ENST00000556375 TRAV41A0A0B4J266 112 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 NUDT19A8MXV4 375 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 G3V4G9 280 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 APOA1P02647 267 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 RPLP1P05386 114 aaKnown RBP9.03□□□□□ -0.96
SLIRP-206ENST00000556375 RRASP10301 218 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 PTHLHP12272 177 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 PSMB8P28062 276 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
SLIRP-206ENST00000556375 DUTP33316 252 aaKnown RBP9.03□□□□□ -0.96
SLIRP-206ENST00000556375 LGALS7P47929 136 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 TAS2R20P59543 309 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 RPS16P62249 146 aaKnown RBP9.03□□□□□ -0.96
SLIRP-206ENST00000556375 CX3CL1P78423 397 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 TMEM177Q53S58 311 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 ETV3LQ6ZN32 361 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 C1QL4Q86Z23 238 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 ZNF695Q8IW36 515 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 WFDC9Q8NEX5 89 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 ACOT12Q8WYK0 555 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 DDB2Q92466 427 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 SNAPC3Q92966 411 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 HARBI1Q96MB7 349 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 CMTM3Q96MX0 182 aa9.03□□□□□ -0.96
SLIRP-206ENST00000556375 NAA50Q9GZZ1 169 aaKnown RBP9.03□□□□□ -0.96
SLIRP-206ENST00000556375 IGKV1D-13A0A0B4J2D9 117 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 LINC00473A8K010 186 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 G3V318 75 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 SLC25A17O43808 307 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 CA2P00918 260 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 IGLV2-23P01705 113 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 EIF4EP06730 217 aaKnown RBP9.02□□□□□ -0.97
SLIRP-206ENST00000556375 IGKV1-13P0DP09 117 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 CD33P20138 364 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 RORCP51449 518 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 ECSCRQ19T08 205 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 BEAN1Q3B7T3 259 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 C19orf54Q5BKX5 351 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 KPRPQ5T749 579 aaPredicted RBP9.02□□□□□ -0.97
SLIRP-206ENST00000556375 GPR107Q5VW38 600 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 ZNF562Q6V9R5 426 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 LCNL1Q6ZST4 164 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 C18orf65Q6ZTR6 163 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 GPR141Q7Z602 305 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 TCTEX1D1Q8N7M0 179 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 BVESQ8NE79 360 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 MYOZ3Q8TDC0 251 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 IFT46Q9NQC8 304 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 TPSG1Q9NRR2 321 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 NECAP2Q9NVZ3 263 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 COMMD3Q9UBI1 195 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 ANAPC10Q9UM13 185 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 RBMX2Q9Y388 322 aaKnown RBP9.02□□□□□ -0.97
SLIRP-206ENST00000556375 FBXO7Q9Y3I1 522 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 WSB1Q9Y6I7 421 aa9.02□□□□□ -0.97
SLIRP-206ENST00000556375 MEIS3P1A6NDR6 274 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 J3QRK9 145 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 FCN1O00602 326 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 SHOXO15266 292 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 WIPF1O43516 503 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 IGLV1-40P01703 118 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 IGLV2-14P01704 120 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 CDX1P47902 265 aaPredicted RBP9.01□□□□□ -0.97
SLIRP-206ENST00000556375 MSMO1Q15800 293 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 KCTD9Q7L273 389 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 OVCH2Q7RTZ1 564 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 PPP1R27Q86WC6 154 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 LINC00482Q8N8I6 264 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 MINDY2Q8NBR6 621 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 OR5AP2Q8NGF4 316 aa9.01□□□□□ -0.97
SLIRP-206ENST00000556375 OSR1Q8TAX0 266 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms