RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 SMR3AQ99954 134 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 MROQ9BYG7 248 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 ALG9Q9H6U8 611 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 DCLRE1BQ9H816 532 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 POPDC3Q9HBV1 291 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 YARS2Q9Y2Z4 477 aaKnown RBP3.09□□□□□ -1.91
PRPF39-209ENST00000556353 SNX24Q9Y343 169 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 PEX16Q9Y5Y5 336 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 V9GYY9 64 aa3.09□□□□□ -1.91
PRPF39-209ENST00000556353 PRORSD1PA6NEY8 169 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 SEC14L6B5MCN3 397 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 C5orf58C9J3I9 102 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 C15orf65H3BRN8 121 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 OR7A17O14581 309 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 EI24O14681 340 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 MRASO14807 208 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 ARPC1BO15143 372 aaKnown RBP3.08□□□□□ -1.92
PRPF39-209ENST00000556353 CYB5BO43169 146 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 FCN3O75636 299 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 STK16O75716 305 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 EIF3GO75821 320 aaKnown RBP eCLIP3.08□□□□□ -1.92
PRPF39-209ENST00000556353 PTTG1O95997 202 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 MT-CO2P00403 227 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 IFNA17P01571 189 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 HLA-HP01893 362 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 C1QBP02746 253 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 KLK1P06870 262 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 IFI30P13284 250 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 GPX2P18283 190 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 IMPDH1P20839 514 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 DDTP30046 118 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 IFNGR2P38484 337 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 BIDP55957 195 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 OR2B8PP59922 312 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 UBE2KP61086 200 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 HMGCS1Q01581 520 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 NNATQ16517 81 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 C22orf42Q6IC83 251 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 TRIM40Q6P9F5 258 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 PLET1Q6UQ28 207 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 RPS27LQ71UM5 84 aaKnown RBP3.08□□□□□ -1.92
PRPF39-209ENST00000556353 OLIG3Q7RTU3 272 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 OR2W3Q7Z3T1 314 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 GOLGA7Q7Z5G4 137 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 TMEM179BQ7Z7N9 219 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 DHDDSQ86SQ9 333 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF615Q8N8J6 731 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 OR5L2Q8NGL0 311 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 OR4D5Q8NGN0 318 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 OR4S2Q8NH73 311 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 SYNPRQ8TBG9 265 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 GPR151Q8TDV0 419 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 AENQ8WTP8 325 aaKnown RBP3.08□□□□□ -1.92
PRPF39-209ENST00000556353 VPS25Q9BRG1 176 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 EFCAB11Q9BUY7 163 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 PLEKHF2Q9H8W4 249 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 RASL12Q9NYN1 266 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF221Q9UK13 617 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 SAR1BQ9Y6B6 198 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 WNK1Q9H4A3 2382 aa3.08□□□□□ -1.92
PRPF39-209ENST00000556353 TRGV5A0A0B4J1U4 118 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 TRBV9A0A0B4J1U6 114 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 IGSF23A1L1A6 192 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CCDC182A6NF36 153 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 KRBOX1C9JBD0 128 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 FTCDNL1E5RQL4 147 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 TRAPPC2LH3BP13 241 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 K7ERU9 68 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 SLC17A3O00476 420 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 FGF16O43320 207 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 C1QCP02747 245 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CD74P04233 296 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 HPNP05981 417 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 TRAPPC2P0DI81 140 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 TRAPPC2BP0DI82 140 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 HIST1H1EP10412 219 aaKnown RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 PSG2P11465 335 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 ZNF43P17038 809 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 PSMA1P25786 263 aaKnown RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 LOXP28300 417 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 S100GP29377 79 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CD200P41217 278 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 RBM34P42696 430 aaKnown RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 SSR2P43308 183 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 ATP1B3P54709 279 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 UGT2B15P54855 530 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 RAG2P55895 527 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 RAB25P57735 213 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 SELENOTP62341 195 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 PLGLB1Q02325 96 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 EMX1Q04741 257 aaPredicted RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 C2orf80Q0P641 193 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 HERPUD1Q15011 391 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 EXOSC7Q15024 291 aaKnown RBP3.07□□□□□ -1.92
PRPF39-209ENST00000556353 PRR4Q16378 134 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 SLC25A35Q3KQZ1 300 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 FBXL19-AS1Q494R0 122 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 HIST2H2AA3Q6FI13 130 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 ATRAIDQ6UW56 229 aa3.07□□□□□ -1.92
PRPF39-209ENST00000556353 CYS1Q717R9 158 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms