RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TRAV24A0A0B4J272 114 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 OR4C45A6NMZ5 311 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 HSPB6O14558 160 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 NBR2O15453 112 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 OGG1O15527 345 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 MRPS14O60783 128 aaKnown RBP5.12□□□□□ -1.59
ATXN3-236ENST00000556220 HMGN1P05114 100 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 ATF1P18846 271 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 PSMB9P28065 219 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 CD40LGP29965 261 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 TPPP2P59282 170 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 ACTBP60709 375 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 CX3CL1P78423 397 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 IFITM3Q01628 133 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 SPHARQ15513 63 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 TATDN3Q17R31 274 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 MOGAT2Q3SYC2 334 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 AKIRIN2Q53H80 203 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 ACTBL2Q562R1 376 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 PAN3Q58A45 887 aaKnown RBP5.12□□□□□ -1.59
ATXN3-236ENST00000556220 TOR2AQ5JU69 321 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 LIPKQ5VXJ0 399 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 ZNF367Q7RTV3 350 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 LYG2Q86SG7 212 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 SLC35F2Q8IXU6 374 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 NPBQ8NG41 125 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 OR51A4Q8NGJ6 313 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 PP6455Q8WZ26 134 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 C4orf36Q96KX1 117 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 Q96MT0 163 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 SDHCQ99643 169 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-236ENST00000556220 ALG8Q9BVK2 526 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 WFDC10AQ9H1F0 79 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 MIXL1Q9H2W2 232 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 SLA2Q9H6Q3 261 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 BATF3Q9NR55 127 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 NDUFB11Q9NX14 153 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 WARS2Q9UGM6 360 aaKnown RBP5.12□□□□□ -1.59
ATXN3-236ENST00000556220 RNF150Q9ULK6 438 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 RPL36Q9Y3U8 105 aaKnown RBP5.12□□□□□ -1.59
ATXN3-236ENST00000556220 A3GALT2U3KPV4 340 aa5.12□□□□□ -1.59
ATXN3-236ENST00000556220 A0A0B4J203 849 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 SMIM31A0A1B0GVY4 71 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 METTL15A6NJ78 407 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 C15orf65H3BRN8 121 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 SDCBPO00560 298 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-236ENST00000556220 SLC31A2O15432 143 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 MAGEB3O15480 346 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 TRGV3P03979 118 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 CD36P16671 472 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 BMI1P35226 326 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 KCNJ3P48549 501 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 ZNF134P52741 427 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 WNT4P56705 351 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 OR10A3P58181 314 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 MLLT11Q13015 90 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-236ENST00000556220 Q3ZCU0 254 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 CD300EQ496F6 205 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-236ENST00000556220 UTS2BQ765I0 119 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 SAXO1Q8IYX7 474 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 OR10H4Q8NGA5 316 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 OR52N1Q8NH53 320 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 PLPPR1Q8TBJ4 325 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 ARL11Q969Q4 196 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 TMEM203Q969S6 136 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 RFT1Q96AA3 541 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 DGCR14Q96DF8 476 aaKnown RBP5.11□□□□□ -1.59
ATXN3-236ENST00000556220 ADAT3Q96EY9 351 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-236ENST00000556220 PDCD1LG2Q9BQ51 273 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 DCUN1D5Q9BTE7 237 aa5.11□□□□□ -1.59
ATXN3-236ENST00000556220 NXF2Q9GZY0 626 aaKnown RBP5.11□□□□□ -1.59
ATXN3-236ENST00000556220 TRAV8-7A0A075B6U6 113 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 LOC102724200A0A096LPH7 203 aaPredicted RBP5.1□□□□□ -1.59
ATXN3-236ENST00000556220 IGHV3-43A0A0B4J1X8 118 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 A0A0G2JLM5 398 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 TRBV5-5A0A0J9YX44 114 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 C13orf42A0A1B0GVH6 325 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 MSGN1A6NI15 193 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 LANCL1O43813 399 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 RPP14O95059 124 aaKnown RBP5.1□□□□□ -1.59
ATXN3-236ENST00000556220 NDUFA3O95167 84 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 CSTBP04080 98 aaKnown RBP5.1□□□□□ -1.59
ATXN3-236ENST00000556220 IGHV3-43DP0DP04 118 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 TMBIM6P55061 237 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 ZNF45Q02386 682 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 CT45A1Q5HYN5 189 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 UNQ5815/PRO19632Q6UWF5 114 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 Q6ZNX1 250 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 GPR141Q7Z602 305 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 PPP1R27Q86WC6 154 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 SNX29P2Q8IUI4 249 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 GID4Q8IVV7 300 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 STX19Q8N4C7 294 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 ACBD7Q8N6N7 88 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 TMEM217Q8N7C4 229 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 LFNGQ8NES3 379 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 OR5D18Q8NGL1 313 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 CT45A3Q8NHU0 189 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 TRIM63Q969Q1 353 aa5.1□□□□□ -1.59
ATXN3-236ENST00000556220 SPSB1Q96BD6 273 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms