RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 IGKV1D-13A0A0B4J2D9 117 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 SMIM31A0A1B0GVY4 71 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 ATP6V0E1O15342 81 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 HPGDSO60760 199 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 TUSC2O75896 110 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 HLA-DQB1P01920 261 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 IGF1P05019 195 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 IGKV1-13P0DP09 117 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 ZNF182P17025 639 aaPredicted RBP11.94□□□□□ -0.5
ACTN1-217ENST00000556203 PSG5Q15238 335 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 MZT2AQ6P582 158 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 TEX38Q6PEX7 206 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 SNAPC3Q92966 411 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 ADTRPQ96IZ2 230 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 TSNAXQ99598 290 aaKnown RBP11.94□□□□□ -0.5
ACTN1-217ENST00000556203 PARP11Q9NR21 331 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 NECAP2Q9NVZ3 263 aa11.94□□□□□ -0.5
ACTN1-217ENST00000556203 METTL1Q9UBP6 276 aaKnown RBP11.94□□□□□ -0.5
ACTN1-217ENST00000556203 MRPS7Q9Y2R9 242 aaKnown RBP11.94□□□□□ -0.5
ACTN1-217ENST00000556203 MGAM2Q2M2H8 2515 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 SPDEFO95238 335 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 OR5H8P0DN80 308 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 PF4V1P10720 104 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 ELK1P19419 428 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 FCGR2CP31995 323 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
ACTN1-217ENST00000556203 RPL5P46777 297 aaKnown RBP11.93□□□□□ -0.5
ACTN1-217ENST00000556203 RPL23AP62750 156 aaKnown RBP11.93□□□□□ -0.5
ACTN1-217ENST00000556203 TAGLNQ01995 201 aaKnown RBP11.93□□□□□ -0.5
ACTN1-217ENST00000556203 CFHR3Q02985 330 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 CBX3Q13185 183 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 SPCS2Q15005 226 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 RTL8BQ17RB0 113 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 BVESQ8NE79 360 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 CLCC1Q96S66 551 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 ZNF580Q9UK33 172 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 RBMX2Q9Y388 322 aaKnown RBP11.93□□□□□ -0.5
ACTN1-217ENST00000556203 WSB1Q9Y6I7 421 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 WNK1Q9H4A3 2382 aa11.93□□□□□ -0.5
ACTN1-217ENST00000556203 LINC00473A8K010 186 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 FAM25AB3EWG3 89 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 FAM25CB3EWG5 89 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 FAM25GB3EWG6 89 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 G3V318 75 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 FCN1O00602 326 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 SLC25A17O43808 307 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 SLC22A5O76082 557 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 IGLV2-14P01704 120 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 RRASP10301 218 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 AADACP22760 399 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 PRSS3P35030 304 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 CX3CL1P78423 397 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 NDPQ00604 133 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 ZNF660Q6AZW8 331 aaPredicted RBP11.92□□□□□ -0.5
ACTN1-217ENST00000556203 SNX29P2Q8IUI4 249 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 OR5AP2Q8NGF4 316 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 RAB2BQ8WUD1 216 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 DDB2Q92466 427 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 HARBI1Q96MB7 349 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 TPSG1Q9NRR2 321 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 ZFP57Q9NU63 452 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 ANAPC10Q9UM13 185 aa11.92□□□□□ -0.5
ACTN1-217ENST00000556203 SHOXO15266 292 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 CA2P00918 260 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 PPYP01298 95 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 IGLV2-23P01705 113 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 ELANEP08246 267 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 LGALS7P47929 136 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 TMBIM6P55061 237 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 FOXE3Q13461 319 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 CDK10Q15131 360 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 CXorf66Q5JRM2 361 aaPredicted RBP11.91□□□□□ -0.5
ACTN1-217ENST00000556203 LCNL1Q6ZST4 164 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 C18orf65Q6ZTR6 163 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 ABHD5Q8WTS1 349 aa11.91□□□□□ -0.5
ACTN1-217ENST00000556203 TRAV41A0A0B4J266 112 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 CRYZL1O95825 349 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 IGHG4P01861 327 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 PMP2P02689 132 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 PF4P02776 101 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 RPLP1P05386 114 aaKnown RBP11.9□□□□□ -0.5
ACTN1-217ENST00000556203 FXYD4P59646 89 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 ECSCRQ19T08 205 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 TMEM177Q53S58 311 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 KCTD9Q7L273 389 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 KLHL30-AS1Q8NEE0 82 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 GPX8Q8TED1 209 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 SECTM1Q8WVN6 248 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 BCL7BQ9BQE9 202 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 EHFQ9NZC4 300 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 FBXO7Q9Y3I1 522 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 A3GALT2U3KPV4 340 aa11.9□□□□□ -0.5
ACTN1-217ENST00000556203 SRRM4A7MD48 611 aaKnown RBP11.89□□□□□ -0.51
ACTN1-217ENST00000556203 NOL3O60936 208 aaKnown RBP11.89□□□□□ -0.51
ACTN1-217ENST00000556203 FCGR3BO75015 233 aa11.89□□□□□ -0.51
ACTN1-217ENST00000556203 EGR2P11161 476 aaPredicted RBP11.89□□□□□ -0.51
ACTN1-217ENST00000556203 NAT1P18440 290 aa11.89□□□□□ -0.51
ACTN1-217ENST00000556203 PPIFP30405 207 aaKnown RBP11.89□□□□□ -0.51
ACTN1-217ENST00000556203 RFX2P48378 723 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms