RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 S100ZQ8WXG8 99 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 TRIM63Q969Q1 353 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 C5orf30Q96GV9 206 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 WASHC3Q9Y3C0 194 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 CHST1O43916 411 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 APOA2P02652 100 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 DUTP33316 252 aaKnown RBP11.32□□□□□ -0.6
SNX6-206ENST00000556162 INPP1P49441 399 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 SCGB2B2Q4G0G5 96 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 FBLN7Q53RD9 439 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 TRIQKQ629K1 86 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.32□□□□□ -0.6
SNX6-206ENST00000556162 OR4C16Q8NGL9 310 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 HSD17B10Q99714 261 aaKnown RBP11.32□□□□□ -0.6
SNX6-206ENST00000556162 AKIP1Q9NQ31 210 aa11.32□□□□□ -0.6
SNX6-206ENST00000556162 FBN1P35555 2871 aaKnown RBP11.31□□□□□ -0.6
SNX6-206ENST00000556162 GNRHRP30968 328 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 BAK1Q16611 211 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 AADACL3Q5VUY0 350 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 FAAP20Q6NZ36 180 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 ZNF818PQ6ZRF7 136 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 MFSD4AQ8N468 514 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 TERB2Q8NHR7 220 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 NPFFR1Q9GZQ6 430 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 SLC35D1Q9NTN3 355 aa11.31□□□□□ -0.6
SNX6-206ENST00000556162 NCBP2LA6PVI3 153 aaKnown RBP11.3□□□□□ -0.6
SNX6-206ENST00000556162 M0QZK8 103 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 ZNF735P0CB33 412 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 FAUP35544 74 aaKnown RBP11.3□□□□□ -0.6
SNX6-206ENST00000556162 UCP3P55916 312 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 CBX3Q13185 183 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 KLF9Q13886 244 aaPredicted RBP11.3□□□□□ -0.6
SNX6-206ENST00000556162 ZNF57Q68EA5 555 aaPredicted RBP11.3□□□□□ -0.6
SNX6-206ENST00000556162 ZNF66Q6ZN08 573 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 LHFPL1Q86WI0 220 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 PDPNQ86YL7 162 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 Q8N6K4 173 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 OR8H1Q8NGG4 311 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 RBMXL1Q96E39 390 aaKnown RBP11.3□□□□□ -0.6
SNX6-206ENST00000556162 SDHCQ99643 169 aaPredicted RBP11.3□□□□□ -0.6
SNX6-206ENST00000556162 FXYD6Q9H0Q3 95 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 MCUBQ9NWR8 336 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 C1RLQ9NZP8 487 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 MOB4Q9Y3A3 225 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
SNX6-206ENST00000556162 LINC00473A8K010 186 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 RNF212BA8MTL3 300 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 TNFSF12O43508 249 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 HKR1P10072 659 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 RRASP10301 218 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 RTL8BQ17RB0 113 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 KCTD9Q7L273 389 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 SLC38A6Q8IZM9 456 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 BVESQ8NE79 360 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 DEDD2Q8WXF8 326 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 FLYWCH2Q96CP2 140 aaKnown RBP11.29□□□□□ -0.6
SNX6-206ENST00000556162 PRRT1Q99946 306 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 C19orf24Q9BVV8 132 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 GPR31O00270 319 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 S100GP29377 79 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 RPL30P62888 115 aaKnown RBP11.29□□□□□ -0.6
SNX6-206ENST00000556162 OR51S1Q8NGJ8 323 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 OR4C13Q8NGP0 309 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 TCTEX1D2Q8WW35 142 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 DDB2Q92466 427 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 TAF15Q92804 592 aaKnown RBP eCLIP11.29□□□□□ -0.64e-6■■□□□ 11.5
SNX6-206ENST00000556162 RITA1Q96K30 269 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 RNF5Q99942 180 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 HRASLSQ9HDD0 168 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 SCP2D1Q9UJQ7 156 aa11.29□□□□□ -0.6
SNX6-206ENST00000556162 FGF16O43320 207 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 NDUFA7O95182 113 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 IGKV1-16P04430 117 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 PGAM2P15259 253 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 ECI1P42126 302 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 PPP5CP53041 499 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 F2RL1P55085 397 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 RPS16P62249 146 aaKnown RBP11.28□□□□□ -0.6
SNX6-206ENST00000556162 BLCAPP62952 87 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 RELBQ01201 579 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 CATR1Q13166 79 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 EIF4EBP1Q13541 118 aaPredicted RBP11.28□□□□□ -0.6
SNX6-206ENST00000556162 MMDQ15546 238 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 RSRP1Q9BUV0 290 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 PRSS22Q9GZN4 317 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 RANBP3Q9H6Z4 567 aaPredicted RBP11.28□□□□□ -0.6
SNX6-206ENST00000556162 PLSCR3Q9NRY6 295 aa11.28□□□□□ -0.6
SNX6-206ENST00000556162 FCGR3BO75015 233 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 PGLYRP1O75594 196 aaPredicted RBP11.27□□□□□ -0.6
SNX6-206ENST00000556162 TSPAN9O75954 239 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 IL7P13232 177 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 RAG2P55895 527 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 ZNF846Q147U1 533 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 KRTAP21-3Q3LHN1 58 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 ABCA11PQ4W5N1 156 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 C11orf88Q6PI97 169 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 IDO2Q6ZQW0 420 aa11.27□□□□□ -0.6
SNX6-206ENST00000556162 Q6ZSV7 163 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms