RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 Q6ZPA2 131 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 Q6ZRG5 221 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 FAM90A1Q86YD7 464 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 SELENOHQ8IZQ5 122 aaKnown RBP9.22□□□□□ -0.93
SHMT2-216ENST00000554975 ZCCHC24Q8N2G6 241 aaKnown RBP9.22□□□□□ -0.93
SHMT2-216ENST00000554975 PPP1R35Q8TAP8 253 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 ZNF418Q8TF45 676 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-216ENST00000554975 GNPNAT1Q96EK6 184 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-216ENST00000554975 CYYR1Q96J86 154 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 RAB40CQ96S21 281 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 PBDC1Q9BVG4 233 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 TLNRD1Q9H1K6 362 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 SMDT1Q9H4I9 107 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 SEBOXQ9HB31 216 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-216ENST00000554975 LPAR2Q9HBW0 351 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 HES4Q9HCC6 221 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 TREM1Q9NP99 234 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 LYRM2Q9NU23 88 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-216ENST00000554975 WIPI2Q9Y4P8 454 aa9.22□□□□□ -0.93
SHMT2-216ENST00000554975 OOEPA6NGQ2 149 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 FAM90A26D6RGX4 464 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 F8W036 122 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 HSD17B6O14756 317 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 ADAM20O43506 726 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 FBXO24O75426 580 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 SCO1O75880 301 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 TSPAN15O95858 294 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 OR2H2O95918 312 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 SPP1P10451 314 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 DAOP14920 347 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 CAMLGP49069 296 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 RAB2AP61019 212 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 RPL23AP62750 156 aaKnown RBP9.21□□□□□ -0.94
SHMT2-216ENST00000554975 PAX5Q02548 391 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 ZNF273Q14593 569 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 PDCD1Q15116 288 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 EFNB3Q15768 340 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 C10orf91Q5T1B1 145 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 MBNL2Q5VZF2 373 aaKnown RBP9.21□□□□□ -0.94
SHMT2-216ENST00000554975 SLC35E4Q6ICL7 350 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 DPPA3Q6W0C5 159 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 FAM219AQ8IW50 185 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-216ENST00000554975 OR10Z1Q8NGY1 313 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 KLF14Q8TD94 323 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-216ENST00000554975 RAB1BQ9H0U4 201 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 IL36RNQ9UBH0 155 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 FZR1Q9UM11 496 aa9.21□□□□□ -0.94
SHMT2-216ENST00000554975 RBM7Q9Y580 266 aaKnown RBP9.21□□□□□ -0.94
SHMT2-216ENST00000554975 IGKV1-6A0A0C4DH72 117 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 A6NLC8 198 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-216ENST00000554975 SIRPB1O00241 398 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 PGLYRP1O75594 196 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-216ENST00000554975 LY86O95711 162 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 AVPP01185 164 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 EPHA1P21709 976 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 LMO1P25800 156 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 GLRXP35754 106 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 PPOXP50336 477 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 AKR1C2P52895 323 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 PSG7Q13046 419 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 PEA15Q15121 130 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 BATF2Q8N1L9 274 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 DMBX1Q8NFW5 382 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 OR52M1Q8NGK5 317 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 LYPD6BQ8NI32 183 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 ZNF488Q96MN9 340 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 MRPL37Q9BZE1 423 aaKnown RBP9.2□□□□□ -0.94
SHMT2-216ENST00000554975 TOLLIPQ9H0E2 274 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 C11orf1Q9H5F2 150 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 CCL28Q9NRJ3 127 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 UQCC1Q9NVA1 299 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 HIF1ANQ9NWT6 349 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 DUSP13Q9UII6 198 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 RNF150Q9ULK6 438 aa9.2□□□□□ -0.94
SHMT2-216ENST00000554975 LOC105371242A0A075B767 164 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 IGKV1D-13A0A0B4J2D9 117 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 A0A1B0GWJ7 208 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 WNT9BO14905 357 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 SSSCA1O60232 199 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 RHBDL1O75783 438 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 HBE1P02100 147 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 PRH1P02810 166 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 IGKV1-13P0DP09 117 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 RCC1P18754 421 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-216ENST00000554975 LPAR6P43657 344 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 TAS2R30P59541 319 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 SELENOVP59797 346 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 ID3Q02535 119 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 BTN1A1Q13410 526 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 BTNL8Q6UX41 500 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 WDR86Q86TI4 376 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 CLRN3Q8NCR9 226 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 IL1F10Q8WWZ1 152 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 ERGIC1Q969X5 290 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 TMEM186Q96B77 213 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 GALMQ96C23 342 aa9.19□□□□□ -0.94
SHMT2-216ENST00000554975 SMIM3Q9BZL3 60 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms