RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 PRSS3P35030 304 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 RFX2P48378 723 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 EIF4EBP1Q13541 118 aaPredicted RBP9.73□□□□□ -0.85
SYNE2-214ENST00000554928 C5orf64Q2M2E5 130 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 NSUN5P1Q3KNT7 163 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 MZT2AQ6P582 158 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 LCNL1Q6ZST4 164 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 CENPVQ7Z7K6 275 aaPredicted RBP9.73□□□□□ -0.85
SYNE2-214ENST00000554928 BVESQ8NE79 360 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 NPBQ8NG41 125 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 OR8H1Q8NGG4 311 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 DDB2Q92466 427 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 AP3S1Q92572 193 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 ABHD1Q96SE0 405 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 RASL11BQ9BPW5 248 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 BCL7BQ9BQE9 202 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 SLIRPQ9GZT3 109 aaKnown RBP9.73□□□□□ -0.85
SYNE2-214ENST00000554928 GHITMQ9H3K2 345 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 IFT46Q9NQC8 304 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 CCL28Q9NRJ3 127 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 SLC35D1Q9NTN3 355 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 CCDC59Q9P031 241 aaKnown RBP9.73□□□□□ -0.85
SYNE2-214ENST00000554928 FBXO7Q9Y3I1 522 aa9.73□□□□□ -0.85
SYNE2-214ENST00000554928 IGHV7-81A0A0B4J1V7 117 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 A0A1W2PRX2 142 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 SRRM4A7MD48 611 aaKnown RBP9.72□□□□□ -0.85
SYNE2-214ENST00000554928 PPYP01298 95 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 IGLV2-23P01705 113 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 HLA-DMAP28067 261 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 CBX5P45973 191 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 LUMP51884 338 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-214ENST00000554928 BRWD1-AS2P59051 145 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 CD83Q01151 205 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 CDK10Q15131 360 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 PSG5Q15238 335 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 OR2B11Q5JQS5 317 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 ZNF660Q6AZW8 331 aaPredicted RBP9.72□□□□□ -0.85
SYNE2-214ENST00000554928 TREML4Q6UXN2 200 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 C18orf65Q6ZTR6 163 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 STPG2Q8N412 459 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 ZNF645Q8N7E2 425 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 OR5AP2Q8NGF4 316 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 CLCC1Q96S66 551 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 NECAP2Q9NVZ3 263 aa9.72□□□□□ -0.85
SYNE2-214ENST00000554928 RBMX2Q9Y388 322 aaKnown RBP9.72□□□□□ -0.85
SYNE2-214ENST00000554928 PKD1L1Q8TDX9 2849 aa9.71□□□□□ -0.85
SYNE2-214ENST00000554928 WNK1Q9H4A3 2382 aa9.71□□□□□ -0.85
SYNE2-214ENST00000554928 SMIM31A0A1B0GVY4 71 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 PSMB11A5LHX3 300 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 G3V318 75 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 RRHO14718 337 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 MC5RP33032 325 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 SOX6P35712 828 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 THBS3P49746 956 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 FXYD4P59646 89 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 RPS16P62249 146 aaKnown RBP9.71□□□□□ -0.86
SYNE2-214ENST00000554928 SSBP2P81877 361 aaPredicted RBP9.71□□□□□ -0.86
SYNE2-214ENST00000554928 OVCH2Q7RTZ1 564 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 PDPNQ86YL7 162 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 OR52I2Q8NH67 350 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 FAM110DQ8TAY7 271 aaPredicted RBP9.71□□□□□ -0.86
SYNE2-214ENST00000554928 SECTM1Q8WVN6 248 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 DCUN1D5Q9BTE7 237 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 EHFQ9NZC4 300 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 KLK11Q9UBX7 282 aa9.71□□□□□ -0.86
SYNE2-214ENST00000554928 MGAM2Q2M2H8 2515 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 CCDC160A6NGH7 325 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 ATP6V0E1O15342 81 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 RGS5O15539 181 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 TNFSF12O43508 249 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 SLC25A17O43808 307 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 NOL3O60936 208 aaKnown RBP9.7□□□□□ -0.86
SYNE2-214ENST00000554928 HLA-DRB1P01911 266 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 APOA2P02652 100 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 CRYGBP07316 175 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 EGR2P11161 476 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-214ENST00000554928 HRH1P35367 487 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 DGCR2P98153 550 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 CFHR3Q02985 330 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 PJVKQ0ZLH3 352 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 MRGPRG-AS1Q2M3A8 158 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 LCE2AQ5TA79 106 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-214ENST00000554928 LIN54Q6MZP7 749 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 TMEM17Q86X19 198 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 FLYWCH2Q96CP2 140 aaKnown RBP9.7□□□□□ -0.86
SYNE2-214ENST00000554928 NXF2Q9GZY0 626 aaKnown RBP9.7□□□□□ -0.86
SYNE2-214ENST00000554928 FXYD6Q9H0Q3 95 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 TAS2R8Q9NYW2 309 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 METTL1Q9UBP6 276 aaKnown RBP9.7□□□□□ -0.86
SYNE2-214ENST00000554928 ADAM30Q9UKF2 790 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 WSB1Q9Y6I7 421 aa9.7□□□□□ -0.86
SYNE2-214ENST00000554928 M0QYG6 137 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 M0QZ24 198 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 AP4M1O00189 453 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 ARPC1BO15143 372 aaKnown RBP9.69□□□□□ -0.86
SYNE2-214ENST00000554928 FCGR3BO75015 233 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 RBBP9O75884 186 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 CRYZL1O95825 349 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 CA2P00918 260 aa9.69□□□□□ -0.86
SYNE2-214ENST00000554928 CSF1P09603 554 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms