RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 SLC25A17O43808 307 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 SSX5O60225 188 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 IGKV1-16P04430 117 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 IGF1P05019 195 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 NFYAP23511 347 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-213ENST00000554600 RPS19P39019 145 aaKnown RBP8.36□□□□□ -1.07
SHMT2-213ENST00000554600 THBS3P49746 956 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 LUMP51884 338 aaPredicted RBP8.36□□□□□ -1.07
SHMT2-213ENST00000554600 PSG5Q15238 335 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 RTL8BQ17RB0 113 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 CNIH2Q6PI25 160 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 PDPNQ86YL7 162 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 SAMD12Q8N8I0 201 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 BVESQ8NE79 360 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 S100A16Q96FQ6 103 aaKnown RBP8.36□□□□□ -1.07
SHMT2-213ENST00000554600 DUX3Q96PT4 197 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 RNF5Q99942 180 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 TOLLIPQ9H0E2 274 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 ANXA10Q9UJ72 324 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 SPATA2Q9UM82 520 aa8.36□□□□□ -1.07
SHMT2-213ENST00000554600 A0A0A6YYH2 397 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 A0A1W2PN81 502 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 MEIS3P1A6NDR6 274 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 A6NJ64 397 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 FCN1O00602 326 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 SHOXO15266 292 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 TMEM127O75204 238 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 TUSC2O75896 110 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 CNIH1O95406 144 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 CA2P00918 260 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 IGHG4P01861 327 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 SMIM18P0DKX4 95 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 SLC6A1P30531 599 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 CHRNA7P36544 502 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 VBP1P61758 197 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 NCS1P62166 190 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 GNB1P62873 340 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 CX3CL1P78423 397 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 NDPQ00604 133 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 TMEM267Q0VDI3 215 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-213ENST00000554600 DEFB136Q30KP8 78 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 UBE2NLQ5JXB2 153 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 ZNF660Q6AZW8 331 aaPredicted RBP8.35□□□□□ -1.07
SHMT2-213ENST00000554600 ETV3LQ6ZN32 361 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 PPP1R27Q86WC6 154 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 MRPL41Q8IXM3 137 aaKnown RBP8.35□□□□□ -1.07
SHMT2-213ENST00000554600 GVQW1Q8N7I0 195 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 BEST4Q8NFU0 473 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 OR13F1Q8NGS4 319 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 C5orf30Q96GV9 206 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 RCC1LQ96I51 464 aaKnown RBP8.35□□□□□ -1.07
SHMT2-213ENST00000554600 ADTRPQ96IZ2 230 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 HARBI1Q96MB7 349 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 FAM103A1Q9BTL3 118 aaKnown RBP8.35□□□□□ -1.07
SHMT2-213ENST00000554600 FUNDC2Q9BWH2 189 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 MRPS26Q9BYN8 205 aaKnown RBP8.35□□□□□ -1.07
SHMT2-213ENST00000554600 AUNIPQ9H7T9 357 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 OR2W1Q9Y3N9 320 aa8.35□□□□□ -1.07
SHMT2-213ENST00000554600 CCL24O00175 119 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 SPDEFO95238 335 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 CRYZL1O95825 349 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 RRASP10301 218 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 PTHLHP12272 177 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 MYCNOSP40205 109 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 TAGLNQ01995 201 aaKnown RBP8.34□□□□□ -1.07
SHMT2-213ENST00000554600 CFHR3Q02985 330 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 UNQ5815/PRO19632Q6UWF5 114 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 ZNF645Q8N7E2 425 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 LINC00482Q8N8I6 264 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 WFDC9Q8NEX5 89 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 GRPEL2Q8TAA5 225 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 DPF1Q92782 380 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 RAX2Q96IS3 184 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 OR5B12Q96R08 314 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 DCUN1D5Q9BTE7 237 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 IFT46Q9NQC8 304 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 TPSG1Q9NRR2 321 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 ZNF580Q9UK33 172 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 GAB2Q9UQC2 676 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 FBXO7Q9Y3I1 522 aa8.34□□□□□ -1.07
SHMT2-213ENST00000554600 XRCC3O43542 346 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 PSMB8P28062 276 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 CD40LGP29965 261 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 PPIFP30405 207 aaKnown RBP8.33□□□□□ -1.08
SHMT2-213ENST00000554600 DUTP33316 252 aaKnown RBP8.33□□□□□ -1.08
SHMT2-213ENST00000554600 CBX5P45973 191 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 CDX1P47902 265 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-213ENST00000554600 LGALS7P47929 136 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 FXYD3Q14802 87 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 VMA21Q3ZAQ7 101 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 ACTBL2Q562R1 376 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 OR2B11Q5JQS5 317 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 TMEM69Q5SWH9 247 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 KPRPQ5T749 579 aaPredicted RBP8.33□□□□□ -1.08
SHMT2-213ENST00000554600 FOXB2Q5VYV0 432 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 KCTD9Q7L273 389 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 RNF152Q8N8N0 203 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 LFNGQ8NES3 379 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 CASTOR1Q8WTX7 329 aa8.33□□□□□ -1.08
SHMT2-213ENST00000554600 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms