RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 OR2A4O95047 310 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 IFNA21P01568 189 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 GIPP09681 153 aaPredicted RBP6.22□□□□□ -1.41
TDP1-209ENST00000554180 RRASP10301 218 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 VDAC1P21796 283 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 COX7A1P24310 79 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 HTR1DP28221 377 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 UBE2E1P51965 193 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 RPL30P62888 115 aaKnown RBP6.22□□□□□ -1.41
TDP1-209ENST00000554180 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
TDP1-209ENST00000554180 ZNF816Q0VGE8 651 aaPredicted RBP6.22□□□□□ -1.41
TDP1-209ENST00000554180 TMEM249Q2WGJ8 235 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 SP6Q3SY56 376 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 MINOS1Q5TGZ0 78 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 HCP5Q6MZN7 132 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 TGIF2LXQ8IUE1 241 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 ZNF695Q8IW36 515 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 SPAG16Q8N0X2 631 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 OR5AN1Q8NGI8 311 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 OR4S2Q8NH73 311 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 TCTEX1D2Q8WW35 142 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 DDB2Q92466 427 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 C18orf12Q96KH6 178 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 OR2A7Q96R45 310 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 NEURL2Q9BR09 285 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 PLEKHA2Q9HB19 425 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 COMMD9Q9P000 198 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 DPM3Q9P2X0 92 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 MGAT4CQ9UBM8 478 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 TMED3Q9Y3Q3 217 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 TBL2Q9Y4P3 447 aaKnown RBP6.22□□□□□ -1.41
TDP1-209ENST00000554180 MINOS1-NBL1R4GNA1 71 aa6.22□□□□□ -1.41
TDP1-209ENST00000554180 LY6LH3BQJ8 138 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 GOSR2O14653 212 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 HPRT1P00492 218 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 APOA2P02652 100 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 GAPDHP04406 335 aaKnown RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 ARG1P05089 322 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 CT45A6P0DMU7 189 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 CT45A5P0DMU8 189 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 CT45A7P0DMV0 189 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 SLC25A6P12236 298 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 ZNF16P17020 682 aaPredicted RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 CXCL3P19876 107 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 MC5RP33032 325 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 RAB13P51153 203 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 RAP2BP61225 183 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 SRSF4Q08170 494 aaKnown RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 RTL8BQ17RB0 113 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 MIDNQ504T8 468 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 ZNF585BQ52M93 769 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 TMEM268Q5VZI3 342 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 CCDC144NLQ6NUI1 221 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 C1orf229Q6ZS94 237 aaPredicted RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 FAM219AQ8IW50 185 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 SELENOHQ8IZQ5 122 aaKnown RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 TCTE3Q8IZS6 198 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 OR8H3Q8N146 312 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 SLC35G3Q8N808 338 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 UXS1Q8NBZ7 420 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 WFDC11Q8NEX6 87 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 LHFPL5Q8TAF8 219 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 LSM10Q969L4 123 aaKnown RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 RPEQ96AT9 228 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 ST6GAL2Q96JF0 529 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 GPHA2Q96T91 129 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 SPIN2AQ99865 258 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 SPIN2BQ9BPZ2 258 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 MRPL20Q9BYC9 149 aaKnown RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 ZNF436Q9C0F3 470 aaPredicted RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 HIF1ANQ9NWT6 349 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 ZNRD1Q9P1U0 126 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 AUP1Q9Y679 476 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 FLNAP21333 2647 aaKnown RBP6.21□□□□□ -1.42
TDP1-209ENST00000554180 MYO9AB2RTY4 2548 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 CSMD1Q96PZ7 3565 aa6.21□□□□□ -1.42
TDP1-209ENST00000554180 YLPM1P49750 1951 aaKnown RBP6.2□□□□□ -1.42
TDP1-209ENST00000554180 MARCH11A6NNE9 402 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 FAM90A9PA6NNJ1 464 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 H0YJW9 148 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 RAMP3O60896 148 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 FCGR3BO75015 233 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 ADAP1O75689 374 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 IGHV4-31P0DP07 118 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 EPHA1P21709 976 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 LPAR6P43657 344 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 ARHGDIBP52566 201 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 AKR1C2P52895 323 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 LGALS4P56470 323 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 H2BFSP57053 126 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 BRWD1-AS2P59051 145 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 BPIFB3P59826 476 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 CD83Q01151 205 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 KLRD1Q13241 179 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 HABP2Q14520 560 aaPredicted RBP6.2□□□□□ -1.42
TDP1-209ENST00000554180 NMSQ5H8A3 153 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 TPTE2P1Q5T6R2 138 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 GGNBP1Q5YKI7 109 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 GSG1LQ6UXU4 331 aa6.2□□□□□ -1.42
TDP1-209ENST00000554180 PDPNQ86YL7 162 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms