RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 IGKV1-39P01597 117 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 HLA-AP01891 365 aaKnown RBP2.8□□□□□ -1.96
PABPN1-204ENST00000554062 HLA-DRAP01903 254 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 IGKV1D-39P04432 117 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 SOD3P08294 240 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 SPNP16150 400 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 CMC4P56277 68 aaPredicted RBP2.8□□□□□ -1.96
PABPN1-204ENST00000554062 PDGFRLQ15198 375 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 SPOPLQ6IQ16 392 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 TTC33Q6PID6 262 aaPredicted RBP2.8□□□□□ -1.96
PABPN1-204ENST00000554062 Q6ZS52 159 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 OLIG3Q7RTU3 272 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 PRNTQ86SH4 94 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 BOD1L2Q8IYS8 172 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 STOML3Q8TAV4 291 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 KLF14Q8TD94 323 aaPredicted RBP2.8□□□□□ -1.96
PABPN1-204ENST00000554062 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.8□□□□□ -1.962e-9■■■□□ 16
PABPN1-204ENST00000554062 OTUB2Q96DC9 234 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 CMTM5Q96DZ9 223 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 ANKRD36BP1Q96IX9 119 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 TMEM56Q96MV1 263 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 OLFM3Q96PB7 478 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 DERL3Q96Q80 235 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 MS4A8Q9BY19 250 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 CSMD1Q96PZ7 3565 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 ARHGAP21Q5T5U3 1957 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 PLXNB3Q9ULL4 1909 aa2.8□□□□□ -1.96
PABPN1-204ENST00000554062 SPTA1P02549 2419 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 URB1O60287 2271 aaKnown RBP2.79□□□□□ -1.96
PABPN1-204ENST00000554062 PRRC2AP48634 2157 aaKnown RBP2.79□□□□□ -1.96
PABPN1-204ENST00000554062 CEACAM18A8MTB9 384 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 LEUTXA8MZ59 168 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 FTCDNL1E5RQL4 147 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 H3BP45 60 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 SMLR1H3BR10 107 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 CRTAPO75718 401 aaPredicted RBP2.79□□□□□ -1.96
PABPN1-204ENST00000554062 RBBP9O75884 186 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 NRASP01111 189 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 HRASP01112 189 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 KRASP01116 189 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 IGLV3-19P01714 112 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 TNNC2P02585 160 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 OCM2P0CE71 109 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 HLA-DMAP28067 261 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 PPP1R2P41236 205 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 MAGEA2P43356 314 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 ARPP19P56211 112 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 MAGOHP61326 146 aaKnown RBP2.79□□□□□ -1.96
PABPN1-204ENST00000554062 ELF3P78545 371 aaPredicted RBP2.79□□□□□ -1.96
PABPN1-204ENST00000554062 CCDC122Q5T0U0 273 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 NXNL2Q5VZ03 156 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 SPINT4Q6UDR6 99 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 SPNS3Q6ZMD2 512 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 FAM210AQ96ND0 272 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 RBP7Q96R05 134 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 CISHQ9NSE2 258 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 TAS2R13Q9NYV9 303 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 NYNRINQ9P2P1 1898 aaKnown RBP2.79□□□□□ -1.96
PABPN1-204ENST00000554062 COL6A6A6NMZ7 2263 aa2.79□□□□□ -1.96
PABPN1-204ENST00000554062 TRPM6Q9BX84 2022 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
PABPN1-204ENST00000554062 COL27A1Q8IZC6 1860 aaPredicted RBP2.78□□□□□ -1.96
PABPN1-204ENST00000554062 IGLV2-18A0A075B6J9 118 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 IZUMO1RA6ND01 250 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 ZNF98A6NK75 572 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 K7ERS5 55 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 CCRL2O00421 344 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 MFNGO00587 321 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 NIPSNAP2O75323 286 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 IGLV7-43P04211 117 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 KRT7P08729 469 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 PAEPP09466 180 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 SEC11BP0C7V7 166 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 RD3LP0DJH9 198 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 CD28P10747 220 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 ZNF3P17036 446 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 ACTR1BP42025 376 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 HSPA13P48723 471 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 UBE2IP63279 158 aaKnown RBP2.78□□□□□ -1.96
PABPN1-204ENST00000554062 OR5K1Q8NHB7 308 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 PYURFQ96I23 114 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 METTL9Q9H1A3 318 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 PIEZO2Q9H5I5 2752 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 SEC16AO15027 2179 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 RP1P56715 2156 aa2.78□□□□□ -1.96
PABPN1-204ENST00000554062 FLNBO75369 2602 aaKnown RBP2.78□□□□□ -1.96
PABPN1-204ENST00000554062 PTPRBP23467 1997 aa2.78□□□□□ -1.97
PABPN1-204ENST00000554062 SHROOM3Q8TF72 1996 aa2.78□□□□□ -1.97
PABPN1-204ENST00000554062 FLNCQ14315 2725 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 COL5A1P20908 1838 aaPredicted RBP2.77□□□□□ -1.97
PABPN1-204ENST00000554062 CROCCQ5TZA2 2017 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 CXorf51AA0A1B0GTR3 108 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 LRCOL1A6NCL2 159 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 KLRC4-KLRK1H3BQV0 150 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 ZW10O43264 779 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 STX10O60499 249 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 HPGDSO60760 199 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 KCNK2O95069 426 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 CDRT1O95170 752 aa2.77□□□□□ -1.97
PABPN1-204ENST00000554062 APOEP02649 317 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms