RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 OR52N1Q8NH53 320 aa5.03□□□□□ -1.6
ATXN3-224ENST00000554040 TNFAIP8L1Q8WVP5 186 aa5.03□□□□□ -1.6
ATXN3-224ENST00000554040 YPEL2Q96QA6 119 aa5.03□□□□□ -1.6
ATXN3-224ENST00000554040 ARPC5LQ9BPX5 153 aa5.03□□□□□ -1.6
ATXN3-224ENST00000554040 GNG8Q9UK08 70 aa5.03□□□□□ -1.6
ATXN3-224ENST00000554040 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 M0R2N4 97 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 SNX3O60493 162 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 CST1P01037 141 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 ANXA8P13928 327 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 RCC1P18754 421 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 PRKACGP22612 351 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 CBLN1P23435 193 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 PPP1CCP36873 323 aaKnown RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 LGALS7P47929 136 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 MFAP2P55001 183 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 RBM11P57052 281 aaKnown RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 RPS16P62249 146 aaKnown RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 SSBP2P81877 361 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 HTD2P86397 168 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 GNMTQ14749 295 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 ODF1Q14990 250 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 PTGES3Q15185 160 aaKnown RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 MPV17LQ2QL34 196 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 LGALS9BQ3B8N2 356 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 FAM98BQ52LJ0 330 aaKnown RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 TP53I3Q53FA7 332 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 GLDNQ6ZMI3 551 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 FAM220AQ7Z4H9 259 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 GID4Q8IVV7 300 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 GAPTQ8N292 157 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 NEK7Q8TDX7 302 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 THRSPQ92748 146 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 CPNE2Q96FN4 548 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 GPER1Q99527 375 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 ALG8Q9BVK2 526 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 METTL9Q9H1A3 318 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 TAF9BQ9HBM6 251 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 SCRT2Q9NQ03 307 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 IL36GQ9NZH8 169 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 PIPOXQ9P0Z9 390 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 WARS2Q9UGM6 360 aaKnown RBP5.02□□□□□ -1.61
ATXN3-224ENST00000554040 ENOPH1Q9UHY7 261 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 JPT1Q9UK76 154 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 WASHC3Q9Y3C0 194 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 SELENOKQ9Y6D0 94 aa5.02□□□□□ -1.61
ATXN3-224ENST00000554040 FAM90A23PA8MXZ1 464 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 MCRIP1C9JLW8 97 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 C11orf94C9JXX5 98 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 H7C2Y5 167 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 LGALS9O00182 355 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 GABRPO00591 440 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 RAB29O14966 203 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 CDRT1O95170 752 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 EPHA2P29317 976 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 CCR9P51686 369 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 ZNF85Q03923 595 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 ATP5G2Q06055 141 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 RPL39P5Q59GN2 51 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 C6orf141Q5SZD1 244 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 LPCAT4Q643R3 524 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 C5orf24Q7Z6I8 188 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 HS3ST5Q8IZT8 346 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 PARP16Q8N5Y8 322 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 POM121L12Q8N7R1 296 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 OR2AK2Q8NG84 335 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 KCNG3Q8TAE7 436 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 TMEM163Q8TC26 289 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 PELI1Q96FA3 418 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 TSNAXQ99598 290 aaKnown RBP5.01□□□□□ -1.61
ATXN3-224ENST00000554040 RARRES2Q99969 163 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 ELAC2Q9BQ52 826 aaKnown RBP5.01□□□□□ -1.61
ATXN3-224ENST00000554040 PRRG3Q9BZD7 231 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 FAM192AQ9GZU8 254 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 IFI27L2Q9H2X8 130 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 C11orf68Q9H3H3 251 aaKnown RBP5.01□□□□□ -1.61
ATXN3-224ENST00000554040 SPACA1Q9HBV2 294 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 COA4Q9NYJ1 87 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 KCNIP1Q9NZI2 227 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 MLXQ9UH92 298 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 ZNF230Q9UIE0 474 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-224ENST00000554040 GMPPBQ9Y5P6 360 aa5.01□□□□□ -1.61
ATXN3-224ENST00000554040 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 TRAV25A0A0B4J276 109 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 OR4C45A6NMZ5 311 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 C16orf90A8MZG2 172 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 M0R129 80 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 GNGT2O14610 69 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 GGCTO75223 188 aaKnown RBP5□□□□□ -1.61
ATXN3-224ENST00000554040 CA11O75493 328 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 OR2C1O95371 312 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 HLA-AP01891 365 aaKnown RBP5□□□□□ -1.61
ATXN3-224ENST00000554040 IGKV1-16P04430 117 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 HTR1AP08908 422 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 RAB3AP20336 220 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 FCGR2BP31994 310 aaPredicted RBP5□□□□□ -1.61
ATXN3-224ENST00000554040 ATP6V1E1P36543 226 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 MAP2K4P45985 399 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 MNAT1P51948 309 aa5□□□□□ -1.61
ATXN3-224ENST00000554040 RHOGP84095 191 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms