RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 DBX1A6NMT0 343 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 ODF3BA8MYP8 253 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 BUB1B-PAK6H3BSN5 160 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 SERPINE2P07093 398 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 IGHV4-31P0DP07 118 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 KIR2DS2P43631 304 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 THBS3P49746 956 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 LINC00205P59089 165 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 LRTM2Q8N967 370 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 DRAXINQ8NBI3 349 aaPredicted RBP9.55□□□□□ -0.88
NEK9-202ENST00000553823 OR11H7Q8NGC8 314 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 LHX4Q969G2 390 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 TMEM56Q96MV1 263 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 FAM212BQ9NTI7 297 aaPredicted RBP9.55□□□□□ -0.88
NEK9-202ENST00000553823 PRELID3BQ9Y3B1 194 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 AUP1Q9Y679 476 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 TMEM56-RWDD3S4R434 201 aa9.55□□□□□ -0.88
NEK9-202ENST00000553823 ACANP16112 2415 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 ZANQ9Y493 2812 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 PIGBOS1A0A0B4J2F0 54 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 LY6LH3BQJ8 138 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 GOSR2O14653 212 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 PFDN1O60925 122 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 CDS2O95674 445 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 CT45A6P0DMU7 189 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 CT45A5P0DMU8 189 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 CT45A7P0DMV0 189 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 RPA2P15927 270 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 CXCL3P19876 107 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 HTR1DP28221 377 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 UBE2E1P51965 193 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 C2orf68Q2NKX9 166 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 ZNF585BQ52M93 769 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 OR2B11Q5JQS5 317 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 TMEM268Q5VZI3 342 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 TGIF2LXQ8IUE1 241 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 ZNF695Q8IW36 515 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 PDZD9Q8IXQ8 264 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 SPAG16Q8N0X2 631 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 ZNF383Q8NA42 475 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 LHFPL5Q8TAF8 219 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 CD300LFQ8TDQ1 290 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 DDB2Q92466 427 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 IL22RA2Q969J5 263 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 RPEQ96AT9 228 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 C18orf12Q96KH6 178 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 MRPL20Q9BYC9 149 aaKnown RBP9.54□□□□□ -0.88
NEK9-202ENST00000553823 C7orf69Q9H7B7 122 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 RAB18Q9NP72 206 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 DPM3Q9P2X0 92 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 TNCP24821 2201 aa9.54□□□□□ -0.88
NEK9-202ENST00000553823 A0A1W2PRD5 423 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 A0A1W2PRF3 423 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 A0A1W2PRM7 423 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 LEUTXA8MZ59 168 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 J3QLI3 93 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 RBFOX2O43251 390 aaKnown RBP eCLIP9.53□□□□□ -0.88
NEK9-202ENST00000553823 RAMP3O60896 148 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 FCGR3BO75015 233 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 CCNKO75909 580 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 TGFAP01135 160 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 GAPDHP04406 335 aaKnown RBP9.53□□□□□ -0.88
NEK9-202ENST00000553823 HOXB5P09067 269 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 HLA-GP17693 338 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 CEACAM3P40198 252 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 LPAR6P43657 344 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 REG1BP48304 166 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 LGALS4P56470 323 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 BRWD1-AS2P59051 145 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 TAGLNQ01995 201 aaKnown RBP9.53□□□□□ -0.88
NEK9-202ENST00000553823 DIAPH2-AS1Q14236 149 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 MINOS1Q5TGZ0 78 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 CYB5R2Q6BCY4 276 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 AKAP14Q86UN6 197 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 SELENOHQ8IZQ5 122 aaKnown RBP9.53□□□□□ -0.88
NEK9-202ENST00000553823 RBPMSQ93062 196 aaKnown RBP9.53□□□□□ -0.88
NEK9-202ENST00000553823 NABP2Q9BQ15 211 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 MINOS1-NBL1R4GNA1 71 aa9.53□□□□□ -0.88
NEK9-202ENST00000553823 CENPVL3A0A0U1RRI6 287 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 DUXBA0A1W2PPF3 345 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 A8MV72 311 aaPredicted RBP9.52□□□□□ -0.89
NEK9-202ENST00000553823 CCSO14618 274 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 TXNL1O43396 289 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 ADAP1O75689 374 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 IFNA21P01568 189 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 APOA2P02652 100 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 EPHA1P21709 976 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 CD83Q01151 205 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 ZNF816Q0VGE8 651 aaPredicted RBP9.52□□□□□ -0.89
NEK9-202ENST00000553823 RTL8BQ17RB0 113 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 MIDNQ504T8 468 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 LDLRAD2Q5SZI1 272 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 TPTE2P1Q5T6R2 138 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 LYZL2Q7Z4W2 148 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 CIARTQ8N365 385 aaPredicted RBP9.52□□□□□ -0.89
NEK9-202ENST00000553823 SLC35G3Q8N808 338 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 OR5AN1Q8NGI8 311 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 OR5M8Q8NGP6 311 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 OR4S2Q8NH73 311 aa9.52□□□□□ -0.89
NEK9-202ENST00000553823 NEURL2Q9BR09 285 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms