RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 SNAPC3Q92966 411 aa15.98■□□□□ 0.15
FOXA1-203ENST00000553751 PARP11Q9NR21 331 aa15.98■□□□□ 0.15
FOXA1-203ENST00000553751 PLXNB1O43157 2135 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 IGKV1D-13A0A0B4J2D9 117 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 TUSC2O75896 110 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 SPDEFO95238 335 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 IGKV1-13P0DP09 117 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 DUTP33316 252 aaKnown RBP15.97■□□□□ 0.15
FOXA1-203ENST00000553751 THBS3P49746 956 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 LUMP51884 338 aaPredicted RBP15.97■□□□□ 0.15
FOXA1-203ENST00000553751 ARPC4P59998 168 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 RPS16P62249 146 aaKnown RBP15.97■□□□□ 0.15
FOXA1-203ENST00000553751 FOXE3Q13461 319 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 GPR141Q7Z602 305 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 RNF152Q8N8N0 203 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 DDB2Q92466 427 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 FLYWCH2Q96CP2 140 aaKnown RBP15.97■□□□□ 0.15
FOXA1-203ENST00000553751 COMMD3Q9UBI1 195 aa15.97■□□□□ 0.15
FOXA1-203ENST00000553751 LINC00473A8K010 186 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 G3V318 75 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 J3QRK9 145 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 FCN1O00602 326 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 IGLV2-14P01704 120 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 IGHG4P01861 327 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 RPLP1P05386 114 aaKnown RBP15.96■□□□□ 0.15
FOXA1-203ENST00000553751 OR5H8P0DN80 308 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 CBX5P45973 191 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 RORCP51449 518 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 CX3CL1P78423 397 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 PLGLAQ15195 96 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 LCNL1Q6ZST4 164 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 C18orf65Q6ZTR6 163 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 CMTM3Q96MX0 182 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 TSNAXQ99598 290 aaKnown RBP15.96■□□□□ 0.15
FOXA1-203ENST00000553751 ZFP57Q9NU63 452 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 METTL1Q9UBP6 276 aaKnown RBP15.96■□□□□ 0.15
FOXA1-203ENST00000553751 FBXO7Q9Y3I1 522 aa15.96■□□□□ 0.15
FOXA1-203ENST00000553751 MEIS3P1A6NDR6 274 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 IGLV2-23P01705 113 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 APOA1P02647 267 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 FCER2P06734 321 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 ELANEP08246 267 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 PPIFP30405 207 aaKnown RBP15.95■□□□□ 0.14
FOXA1-203ENST00000553751 TAGLNQ01995 201 aaKnown RBP15.95■□□□□ 0.14
FOXA1-203ENST00000553751 CXorf66Q5JRM2 361 aaPredicted RBP15.95■□□□□ 0.14
FOXA1-203ENST00000553751 SAMD5Q5TGI4 173 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 ETV3LQ6ZN32 361 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 C1QL4Q86Z23 238 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 BVESQ8NE79 360 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 ACOT12Q8WYK0 555 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 ADTRPQ96IZ2 230 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 TPSG1Q9NRR2 321 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 ANAPC10Q9UM13 185 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 WSB1Q9Y6I7 421 aa15.95■□□□□ 0.14
FOXA1-203ENST00000553751 TRAV41A0A0B4J266 112 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 G3V4G9 280 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 SLC25A17O43808 307 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 PF4P02776 101 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 PSMB8P28062 276 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 CRIP2P52943 208 aaPredicted RBP15.94■□□□□ 0.14
FOXA1-203ENST00000553751 DEFA6Q01524 100 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 RTL8BQ17RB0 113 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 TMEM177Q53S58 311 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 C19orf54Q5BKX5 351 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 ZNF660Q6AZW8 331 aaPredicted RBP15.94■□□□□ 0.14
FOXA1-203ENST00000553751 KLHL30-AS1Q8NEE0 82 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 HARBI1Q96MB7 349 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 NECAP2Q9NVZ3 263 aa15.94■□□□□ 0.14
FOXA1-203ENST00000553751 RBMX2Q9Y388 322 aaKnown RBP15.94■□□□□ 0.14
FOXA1-203ENST00000553751 SLC22A5O76082 557 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 CA2P00918 260 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 RRASP10301 218 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 AADACP22760 399 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 SLC6A1P30531 599 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 FCGR2CP31995 323 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 LGALS7P47929 136 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 C8orf86Q6ZUL3 223 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 ZNF695Q8IW36 515 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 MINDY2Q8NBR6 621 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 WFDC9Q8NEX5 89 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 OR5AP2Q8NGF4 316 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 CLCC1Q96S66 551 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 IFT46Q9NQC8 304 aa15.93■□□□□ 0.14
FOXA1-203ENST00000553751 NUDT19A8MXV4 375 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 HPGDSO60760 199 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 IGLV1-40P01703 118 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 CRYGBP07316 175 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 EGR2P11161 476 aaPredicted RBP15.92■□□□□ 0.14
FOXA1-203ENST00000553751 ELK1P19419 428 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 CBX3Q13185 183 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 EIF4EBP1Q13541 118 aaPredicted RBP15.92■□□□□ 0.14
FOXA1-203ENST00000553751 ECSCRQ19T08 205 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 ZNF562Q6V9R5 426 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 OVCH2Q7RTZ1 564 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 MYOZ3Q8TDC0 251 aa15.92■□□□□ 0.14
FOXA1-203ENST00000553751 SRRM4A7MD48 611 aaKnown RBP15.91■□□□□ 0.14
FOXA1-203ENST00000553751 SHOXO15266 292 aa15.91■□□□□ 0.14
FOXA1-203ENST00000553751 PPYP01298 95 aa15.91■□□□□ 0.14
FOXA1-203ENST00000553751 ZNF182P17025 639 aaPredicted RBP15.91■□□□□ 0.14
FOXA1-203ENST00000553751 PRSS3P35030 304 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms