RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 C15orf40Q8WUR7 153 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 FNDC4Q9H6D8 234 aaPredicted RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 TMEM106BQ9NUM4 274 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 B4GALT7Q9UBV7 327 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 TCF19Q9Y242 345 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 A0A1W2PS29 197 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 F5H5K5 113 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 MLNRO43193 412 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 PMS2P2O95744 297 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 GPR75O95800 540 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 AKAIN1P0CW23 69 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 AK4P27144 223 aaPredicted RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 FCGR2BP31994 310 aaPredicted RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 SRP14P37108 136 aaKnown RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 MDH2P40926 338 aaKnown RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 DNASE1L1P49184 302 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 TGFBR3Q03167 851 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 UBE2NLQ5JXB2 153 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 SLC48A1Q6P1K1 146 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 SFTPA1Q8IWL2 248 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 OR5A2Q8NGI9 324 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 ZNF519Q8TB69 540 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 FNDC9Q8TBE3 224 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 FAM213BQ8TBF2 198 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 LGALS14Q8TCE9 139 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 GPR174Q9BXC1 333 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 PPDPFQ9H3Y8 114 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 FAM206AQ9NX38 181 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 KLRF1Q9NZS2 232 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 VPREB3Q9UKI3 123 aa3.43□□□□□ -1.86
RDH11-204ENST00000553578 TNRC18O15417 2968 aaPredicted RBP3.43□□□□□ -1.86
RDH11-204ENST00000553578 IRGMA1A4Y4 181 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 ZAR1LA6NP61 321 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 LINC01565O15544 149 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 HYPMO75409 117 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 IFNA1P01562 189 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 STATHP02808 62 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 SRD5A2P31213 254 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 PYCR1P32322 319 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 EGR4Q05215 589 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 FUT5Q11128 374 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 DHRS2Q13268 280 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 EFNB3Q15768 340 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 TMEM200BQ69YZ2 307 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 SLC16A11Q8NCK7 471 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 ADAD2Q8NCV1 583 aaKnown RBP3.42□□□□□ -1.86
RDH11-204ENST00000553578 OR5W2Q8NH69 310 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 S100A16Q96FQ6 103 aaKnown RBP3.42□□□□□ -1.86
RDH11-204ENST00000553578 PECRQ9BY49 303 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 CHST6Q9GZX3 395 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 SLC7A10Q9NS82 523 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 ICAM5Q9UMF0 924 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 ZNF835Q9Y2P0 537 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 SPTY2D1-AS1A0A0U1RR47 76 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 A0A1B0GVT2 93 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 C11orf98E9PRG8 122 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 DUS4LO95620 317 aaKnown RBP3.42□□□□□ -1.86
RDH11-204ENST00000553578 IGFBP2P18065 325 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 TSPOP30536 169 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 THBS3P49746 956 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 EWSR1Q01844 656 aaKnown RBP eCLIP3.42□□□□□ -1.86
RDH11-204ENST00000553578 ASCL4Q6XD76 172 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 VN1R4Q7Z5H5 301 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 UBALD2Q8IYN6 164 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 MORN4Q8NDC4 146 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 MARCH1Q8TCQ1 289 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 RPP25Q9BUL9 199 aaKnown RBP3.42□□□□□ -1.86
RDH11-204ENST00000553578 ACER3Q9NUN7 267 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 ST6GALNAC2Q9UJ37 374 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 MKI67P46013 3256 aaKnown RBP3.42□□□□□ -1.86
RDH11-204ENST00000553578 URB1O60287 2271 aaKnown RBP3.42□□□□□ -1.86
RDH11-204ENST00000553578 SPTBP11277 2137 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 MYO9BQ13459 2157 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 EYSQ5T1H1 3165 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 MAP1LC3B2A6NCE7 125 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 C4orf51C9J302 202 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 HMGN4O00479 90 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 TNFRSF13BO14836 293 aaPredicted RBP3.42□□□□□ -1.86
RDH11-204ENST00000553578 DEGS1O15121 323 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 CLPSP04118 112 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 GNB3P16520 340 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 CX3CR1P49238 355 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 SRSF4Q08170 494 aaKnown RBP3.42□□□□□ -1.86
RDH11-204ENST00000553578 LRRC10Q5BKY1 277 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 FAM166AQ6J272 317 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 TEX43Q6ZNM6 134 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 BAGE3Q86Y29 109 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 BAGE2Q86Y30 109 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 ATOH7Q8N100 152 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 SLC22A18ASQ8N1D0 253 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 OR5AU1Q8NGC0 362 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 OR4C16Q8NGL9 310 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 NDFIP1Q9BT67 221 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 MAP1LC3BQ9GZQ8 125 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 CST11Q9H112 138 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 FGF21Q9NSA1 209 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 IL36GQ9NZH8 169 aa3.42□□□□□ -1.86
RDH11-204ENST00000553578 A0A087WWC5 75 aa3.41□□□□□ -1.86
RDH11-204ENST00000553578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.41□□□□□ -1.86
RDH11-204ENST00000553578 FFAR1O14842 300 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms