RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 VN1R17PQ8TDU5 208 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 SPSB2Q99619 263 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 PCGF1Q9BSM1 259 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 SPAG17Q6Q759 2223 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 DANCRP0C864 163 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 OR4C12Q96R67 309 aa9.91□□□□□ -0.82
SYNE2-208ENST00000553289 EGR4Q05215 589 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 PMCHL1Q16048 86 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 NHLRC3Q5JS37 347 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 TMEM186Q96B77 213 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 METTL26Q96S19 204 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 PSMG3Q9BT73 122 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-208ENST00000553289 MRPL32Q9BYC8 188 aaKnown RBP9.9□□□□□ -0.82
SYNE2-208ENST00000553289 SRXN1Q9BYN0 137 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 ZMAT5Q9UDW3 170 aaKnown RBP9.9□□□□□ -0.82
SYNE2-208ENST00000553289 KNTC1P50748 2209 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 C8orf88P0DMB2 117 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 RAB9AP51151 201 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 H2BFSP57053 126 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 UNC119Q13432 240 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 NRN1LQ496H8 165 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 POC1AQ8NBT0 407 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 KLF14Q8TD94 323 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-208ENST00000553289 TBX15Q96SF7 602 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 SOSTQ9BQB4 213 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 PTPRZ1P23471 2315 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-208ENST00000553289 COL11A1P12107 1806 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-208ENST00000553289 MARCH11A6NNE9 402 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 LOXL3P58215 753 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 ABLIM2Q6H8Q1 611 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 OR10J6PQ8NGY7 276 aa9.9□□□□□ -0.82
SYNE2-208ENST00000553289 ZNF137PP52743 207 aa9.9□□□□□ -0.83
SYNE2-208ENST00000553289 PSG9Q00887 426 aa9.9□□□□□ -0.83
SYNE2-208ENST00000553289 CLEC2AQ6UVW9 174 aa9.9□□□□□ -0.83
SYNE2-208ENST00000553289 TNFRSF19Q9NS68 423 aa9.9□□□□□ -0.83
SYNE2-208ENST00000553289 TAF1LQ8IZX4 1826 aa9.9□□□□□ -0.83
SYNE2-208ENST00000553289 NRXN2Q9P2S2 1712 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 A0A1W2PQM1 296 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 KCNAB3O43448 404 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF207O43670 478 aaKnown RBP9.89□□□□□ -0.83
SYNE2-208ENST00000553289 OR9G1Q8NH87 305 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 SPSB4Q96A44 273 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 DNAJC4Q9NNZ3 241 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 AURKAIP1Q9NWT8 199 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-208ENST00000553289 PAM16Q9Y3D7 125 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 ARID1AO14497 2285 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 MFAP4P55083 255 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF146Q15072 292 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 ZNF826PQ6ZT77 177 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 OR4B1Q8NGF8 309 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 ZNFX1Q9P2E3 1918 aaKnown RBP9.89□□□□□ -0.83
SYNE2-208ENST00000553289 TRBV9A0A0B4J1U6 114 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 F12P00748 615 aaPredicted RBP9.89□□□□□ -0.83
SYNE2-208ENST00000553289 MAS1LP35410 378 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 TMPRSS3P57727 454 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 SLC35B1P78383 322 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 COL5A1-AS1Q5SY13 56 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 OR52M1Q8NGK5 317 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 OR4C13Q8NGP0 309 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 HSPB7Q9UBY9 170 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 POLR2AP24928 1970 aaKnown RBP9.89□□□□□ -0.83
SYNE2-208ENST00000553289 NKX2-8O15522 239 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 MIC13Q5XKP0 118 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 SYT8Q8NBV8 401 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 TM2D1Q9BX74 207 aa9.89□□□□□ -0.83
SYNE2-208ENST00000553289 QTRT1Q9BXR0 403 aaKnown RBP9.89□□□□□ -0.83
SYNE2-208ENST00000553289 PARP14Q460N5 1801 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 WNT9BO14905 357 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 APELAP0DMC3 54 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
SYNE2-208ENST00000553289 TWIST1Q15672 202 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 OR1P1Q8NH06 330 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 OR5P3Q8WZ94 311 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 AMY1AP04745 511 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 TMSB15BA0A087X1C1 80 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 TMEM238LA0A1B0GVL6 79 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 PGPA6NDG6 321 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 A6NJY4 79 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 NPIPB9F8W1W9 429 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 ERVH48-1M5A8F1 160 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 C1QL1O75973 258 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 RND2P52198 227 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 RELBQ01201 579 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 DNM1P46Q6ZS02 220 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 APCDD1LQ8NCL9 501 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 IGHV3-21A0A0B4J1V1 117 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 CDK2AP1O14519 115 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 SS18L1O75177 396 aaPredicted RBP9.88□□□□□ -0.83
SYNE2-208ENST00000553289 TRGC2P03986 189 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 RND3P61587 244 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 PCSK4Q6UW60 755 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 ELOVL5Q9NYP7 299 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 TCF19Q9Y242 345 aa9.88□□□□□ -0.83
SYNE2-208ENST00000553289 MPTX1A8MV57 137 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 J3KRW8 73 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 KBTBD11O94819 623 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 COTL1Q14019 142 aa9.87□□□□□ -0.83
SYNE2-208ENST00000553289 C19orf48Q6RUI8 117 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms