RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 EBI3Q14213 229 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 HES1Q14469 280 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 RTL8BQ17RB0 113 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 AADACL3Q5VUY0 350 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 C16orf87Q6PH81 154 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 IDO2Q6ZQW0 420 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 TCTEX1D1Q8N7M0 179 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 POC5Q8NA72 575 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 OR4D10Q8NGI6 311 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 OR51S1Q8NGJ8 323 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 PIFOQ8TCI5 191 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 SLC25A21Q9BQT8 299 aaPredicted RBP13.83□□□□□ -0.2
ITGA5-213ENST00000553071 C1RLQ9NZP8 487 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 WASHC3Q9Y3C0 194 aa13.83□□□□□ -0.2
ITGA5-213ENST00000553071 NIPBLQ6KC79 2804 aaeCLIP13.82□□□□□ -0.2
ITGA5-213ENST00000553071 H7C2Y5 167 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 VENTXO95231 258 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 RNASE1P07998 156 aaKnown RBP13.82□□□□□ -0.2
ITGA5-213ENST00000553071 DUTP33316 252 aaKnown RBP13.82□□□□□ -0.2
ITGA5-213ENST00000553071 ABCA11PQ4W5N1 156 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 PDPNQ86YL7 162 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 ZDHHC22Q8N966 263 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 CD300LFQ8TDQ1 290 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 TSC22D3Q99576 134 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 RSRP1Q9BUV0 290 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 SVEP1Q4LDE5 3571 aa13.82□□□□□ -0.2
ITGA5-213ENST00000553071 A6NDX4 124 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 H0YJW9 148 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 IGKV1D-33P01593 117 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 IGKV1-33P01594 117 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 IGLV2-14P01704 120 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 CRYBA1P05813 215 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 SNRNP70P08621 437 aaKnown RBP13.81□□□□□ -0.2
ITGA5-213ENST00000553071 TMEM11P17152 192 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 PAX6P26367 422 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 UBA52P62987 128 aaKnown RBP13.81□□□□□ -0.2
ITGA5-213ENST00000553071 DHRS7BQ6IAN0 325 aaPredicted RBP13.81□□□□□ -0.2
ITGA5-213ENST00000553071 C11orf88Q6PI97 169 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 ZNF818PQ6ZRF7 136 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 KCTD9Q7L273 389 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 CCDC71LQ8N9Z2 235 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 OR4C13Q8NGP0 309 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 FLYWCH2Q96CP2 140 aaKnown RBP13.81□□□□□ -0.2
ITGA5-213ENST00000553071 AIFM2Q9BRQ8 373 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 SLC35D1Q9NTN3 355 aa13.81□□□□□ -0.2
ITGA5-213ENST00000553071 C14orf166Q9Y224 244 aaKnown RBP13.81□□□□□ -0.2
ITGA5-213ENST00000553071 B3GALNT1O75752 331 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 UPK1BO75841 260 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 OR2F2O95006 317 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 CTSDP07339 412 aaPredicted RBP13.8□□□□□ -0.2
ITGA5-213ENST00000553071 LGALS7P47929 136 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 FAAP20Q6NZ36 180 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 MZT2BQ6NZ67 158 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 ZNF383Q8NA42 475 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 DRAXINQ8NBI3 349 aaPredicted RBP13.8□□□□□ -0.2
ITGA5-213ENST00000553071 TCTEX1D2Q8WW35 142 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 EAF1Q96JC9 268 aaPredicted RBP13.8□□□□□ -0.2
ITGA5-213ENST00000553071 RBM14Q96PK6 669 aaKnown RBP13.8□□□□□ -0.2
ITGA5-213ENST00000553071 FXYD6Q9H0Q3 95 aa13.8□□□□□ -0.2
ITGA5-213ENST00000553071 IGHV3-72A0A0B4J1Y9 119 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 PGLYRP1O75594 196 aaPredicted RBP13.79□□□□□ -0.2
ITGA5-213ENST00000553071 DEFA1P59665 94 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 DEFA3P59666 94 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 RND3P61587 244 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 LY6EQ16553 131 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 TSNAXQ99598 290 aaKnown RBP13.79□□□□□ -0.2
ITGA5-213ENST00000553071 CHIAQ9BZP6 476 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 ESM1Q9NQ30 184 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 TNFRSF19Q9NS68 423 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 FAM212BQ9NTI7 297 aaPredicted RBP13.79□□□□□ -0.2
ITGA5-213ENST00000553071 COPZ2Q9P299 210 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 JMJD1CQ15652 2540 aa13.79□□□□□ -0.2
ITGA5-213ENST00000553071 ANK3Q12955 4377 aaKnown RBP13.78□□□□□ -0.2
ITGA5-213ENST00000553071 RBFOX2O43251 390 aaKnown RBP eCLIP13.78□□□□□ -0.2
ITGA5-213ENST00000553071 FGF16O43320 207 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 GPR137BO60478 399 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 CD24P25063 80 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 RIPPLY3P57055 190 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 EIF4EBP1Q13541 118 aaPredicted RBP13.78□□□□□ -0.2
ITGA5-213ENST00000553071 RBMS2Q15434 407 aaKnown RBP13.78□□□□□ -0.2
ITGA5-213ENST00000553071 GLDNQ6ZMI3 551 aaPredicted RBP13.78□□□□□ -0.2
ITGA5-213ENST00000553071 OR13C8Q8NGS7 320 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 OR4S2Q8NH73 311 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 OSR1Q8TAX0 266 aaPredicted RBP13.78□□□□□ -0.2
ITGA5-213ENST00000553071 MARCH1Q8TCQ1 289 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 DDB2Q92466 427 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 SLC25A33Q9BSK2 321 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 NPFFR1Q9GZQ6 430 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 SLC2A9Q9NRM0 540 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 LIN7CQ9NUP9 197 aaKnown RBP13.78□□□□□ -0.2
ITGA5-213ENST00000553071 KIAA1456Q9P272 454 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 GPR132Q9UNW8 380 aa13.78□□□□□ -0.2
ITGA5-213ENST00000553071 LINC00854A0A1B0GVQ3 168 aa13.77□□□□□ -0.21
ITGA5-213ENST00000553071 LINC00473A8K010 186 aa13.77□□□□□ -0.21
ITGA5-213ENST00000553071 LYRM1O43325 122 aa13.77□□□□□ -0.21
ITGA5-213ENST00000553071 PIGPP57054 158 aa13.77□□□□□ -0.21
ITGA5-213ENST00000553071 RPS16P62249 146 aaKnown RBP13.77□□□□□ -0.21
ITGA5-213ENST00000553071 HNF4GQ14541 408 aa13.77□□□□□ -0.21
ITGA5-213ENST00000553071 PHLDA2Q53GA4 152 aa13.77□□□□□ -0.21
ITGA5-213ENST00000553071 Q8N6K4 173 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms