RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 LINC00473A8K010 186 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 NBR2O15453 112 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 PPYP01298 95 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 IGLV2-14P01704 120 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 IGKV1-16P04430 117 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 DUTP33316 252 aaKnown RBP11.17□□□□□ -0.62
PTCH1-226ENST00000553011 HRH1P35367 487 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 THBS3P49746 956 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 TAS2R46P59540 309 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 FXYD4P59646 89 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 DYRK1AQ13627 763 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 OVCH2Q7RTZ1 564 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 SLC35E3Q7Z769 313 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-226ENST00000553011 SECTM1Q8WVN6 248 aa11.17□□□□□ -0.62
PTCH1-226ENST00000553011 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
PTCH1-226ENST00000553011 RBMX2Q9Y388 322 aaKnown RBP11.17□□□□□ -0.62
PTCH1-226ENST00000553011 RBBP9O75884 186 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 TPPPO94811 219 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 NDUFA3O95167 84 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 IGHG2P01859 326 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 RCVRNP35243 200 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 DGCR2P98153 550 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 C5orf64Q2M2E5 130 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 ZNF660Q6AZW8 331 aaPredicted RBP11.16□□□□□ -0.62
PTCH1-226ENST00000553011 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 PDPNQ86YL7 162 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 BVESQ8NE79 360 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 NPBQ8NG41 125 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 GIMAP1Q8WWP7 306 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 DDB2Q92466 427 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 GPHA2Q96T91 129 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 HSPB9Q9BQS6 159 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 FBXL15Q9H469 300 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 CCL28Q9NRJ3 127 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 KLK11Q9UBX7 282 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 LINC00527Q9UJ94 153 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 NBEAL1Q6ZS30 2694 aa11.16□□□□□ -0.62
PTCH1-226ENST00000553011 DPPA5A6NC42 116 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 RRHO14718 337 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 SLC22A5O76082 557 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 CD28P10747 220 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 TNFSF8P32971 234 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 HERV-K104P61576 105 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 RPS16P62249 146 aaKnown RBP11.15□□□□□ -0.62
PTCH1-226ENST00000553011 RPL30P62888 115 aaKnown RBP11.15□□□□□ -0.62
PTCH1-226ENST00000553011 EIF4EBP1Q13541 118 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-226ENST00000553011 IL18Q14116 193 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 TMEM17Q86X19 198 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 C15orf40Q8WUR7 153 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 FLYWCH2Q96CP2 140 aaKnown RBP11.15□□□□□ -0.62
PTCH1-226ENST00000553011 ADTRPQ96IZ2 230 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 ZNF2Q9BSG1 426 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-226ENST00000553011 SLC5A7Q9GZV3 580 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 KIAA1456Q9P272 454 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 MTFP1Q9UDX5 166 aa11.15□□□□□ -0.62
PTCH1-226ENST00000553011 ZNF107Q9UII5 783 aaPredicted RBP11.15□□□□□ -0.62
PTCH1-226ENST00000553011 GABARAPH6UMI1 98 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 M0QYG6 137 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 FBXO24O75426 580 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 PSG5Q15238 335 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 RTL8BQ17RB0 113 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 OR2B11Q5JQS5 317 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 FOXB2Q5VYV0 432 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 PYHIN1Q6K0P9 492 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 DHRS11Q6UWP2 260 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 KCTD9Q7L273 389 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
PTCH1-226ENST00000553011 OR5AU1Q8NGC0 362 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 FCAMRQ8WWV6 532 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 RNF5Q99942 180 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 FXYD6Q9H0Q3 95 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 TAS2R8Q9NYW2 309 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 TRRAPQ9Y4A5 3859 aa11.14□□□□□ -0.63
PTCH1-226ENST00000553011 NOTCH3Q9UM47 2321 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 IGHV7-81A0A0B4J1V7 117 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 FCN1O00602 326 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 TNFSF12O43508 249 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 SLC25A17O43808 307 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 CRYZL1O95825 349 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 HLA-DRB1P01911 266 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 TAGLNQ01995 201 aaKnown RBP11.13□□□□□ -0.63
PTCH1-226ENST00000553011 PLGLAQ15195 96 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 TMEM177Q53S58 311 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 LIN54Q6MZP7 749 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 ZNF818PQ6ZRF7 136 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 FOXRED2Q8IWF2 684 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 STPG2Q8N412 459 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 MFSD4AQ8N468 514 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 SMIM4Q8WVI0 70 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 MOB3AQ96BX8 217 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
PTCH1-226ENST00000553011 TSNAXQ99598 290 aaKnown RBP11.13□□□□□ -0.63
PTCH1-226ENST00000553011 HSD17B10Q99714 261 aaKnown RBP11.13□□□□□ -0.63
PTCH1-226ENST00000553011 SOSTQ9BQB4 213 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 MMP27Q9H306 513 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 TPSG1Q9NRR2 321 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 NDUFA13Q9P0J0 144 aa11.13□□□□□ -0.63
PTCH1-226ENST00000553011 METTL1Q9UBP6 276 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms