RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SRSF4Q08170 494 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 CBX3Q13185 183 aa9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 DRAXINQ8NBI3 349 aaPredicted RBP9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 OR5H2Q8NGV7 314 aa9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 SGMS2Q8NHU3 365 aa9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 RASL11BQ9BPW5 248 aa9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 NXF2Q9GZY0 626 aaKnown RBP9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 SLC35D1Q9NTN3 355 aa9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 EHFQ9NZC4 300 aa9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 KIAA1456Q9P272 454 aa9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 TNCP24821 2201 aa9.28□□□□□ -0.92
TRAFD1-209ENST00000552896 CTDSP2O14595 271 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 FBXO24O75426 580 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 IGLV2-14P01704 120 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 HLA-DRB1P01911 266 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 IGKV1-16P04430 117 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 FCER2P06734 321 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 RRASP10301 218 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 AADACP22760 399 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 CNTFRP26992 372 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 DUTP33316 252 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 HRH1P35367 487 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 MRPS10P82664 201 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 PRR20EP86478 221 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 PRR20CP86479 221 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 PRR20DP86480 221 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 PRR20BP86481 221 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 PRR20AP86496 221 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 DYRK1AQ13627 763 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 RTL8BQ17RB0 113 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 C5orf64Q2M2E5 130 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 ACTBL2Q562R1 376 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 OVCH2Q7RTZ1 564 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 SLC35E3Q7Z769 313 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 FOXRED2Q8IWF2 684 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 MCFD2Q8NI22 146 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 CHPT1Q8WUD6 406 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 GIMAP1Q8WWP7 306 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 DDB2Q92466 427 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 RBMXL1Q96E39 390 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 TSNAXQ99598 290 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 ZNF580Q9UK33 172 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 RBMX2Q9Y388 322 aaKnown RBP9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 A3GALT2U3KPV4 340 aa9.27□□□□□ -0.93
TRAFD1-209ENST00000552896 CMYA5Q8N3K9 4069 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 NBEAL1Q6ZS30 2694 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 LINC00473A8K010 186 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 AP4M1O00189 453 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 RRHO14718 337 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 TBPP20226 339 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 HERV-K104P61576 105 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 SSBP1Q04837 148 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 EIF4EBP1Q13541 118 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 ZNF660Q6AZW8 331 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 KCTD9Q7L273 389 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 SMIM4Q8WVI0 70 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 SECTM1Q8WVN6 248 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 BORCS5Q969J3 196 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 MOB3AQ96BX8 217 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 DIRAS2Q96HU8 199 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 RITA1Q96K30 269 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 HSD17B10Q99714 261 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 HSPB9Q9BQS6 159 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 DCUN1D5Q9BTE7 237 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 MTFP1Q9UDX5 166 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 ZNF107Q9UII5 783 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 FBN3Q75N90 2809 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 MGAM2Q2M2H8 2515 aa9.26□□□□□ -0.93
TRAFD1-209ENST00000552896 GABARAPH6UMI1 98 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 J3QRK9 145 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 M0QZ24 198 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 CTDSPLO15194 276 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 PMP2P02689 132 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 HLA-DMAP28067 261 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 RFX2P48378 723 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 LINC00205P59089 165 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 C2orf68Q2NKX9 166 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 TMEM177Q53S58 311 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 PRR31Q5SQ13 230 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 PYHIN1Q6K0P9 492 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 DHRS11Q6UWP2 260 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 ZNF66Q6ZN08 573 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 TMEM17Q86X19 198 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 LYSMD2Q8IV50 215 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 STPG2Q8N412 459 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 ZBTB34Q8NCN2 500 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 OR4X2Q8NGF9 303 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 OR52I2Q8NH67 350 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 FCAMRQ8WWV6 532 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 FLYWCH2Q96CP2 140 aaKnown RBP9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 HARBI1Q96MB7 349 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 ABHD1Q96SE0 405 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 SLC5A7Q9GZV3 580 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 FXYD6Q9H0Q3 95 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 MMP27Q9H306 513 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 NDUFA13Q9P0J0 144 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 PRELID3BQ9Y3B1 194 aa9.25□□□□□ -0.93
TRAFD1-209ENST00000552896 PSMB11A5LHX3 300 aa9.24□□□□□ -0.93
TRAFD1-209ENST00000552896 IGF1P05019 195 aa9.24□□□□□ -0.93
TRAFD1-209ENST00000552896 LGALS7P47929 136 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms